C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BCL2-associated transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000029363 BCLAF1 9606 - 6:136256863-136289851 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000353331 BCLAF1-201 136256863-136289851 protein_coding
  ENST00000392348 BCLAF1-011 136261110-136279866 protein_coding
  ENST00000476194 BCLAF1-004 136271919-136273550 retained_intron
  ENST00000526228 BCLAF1-015 136261301-136268409 retained_intron
  ENST00000527536 BCLAF1-005 136258586-136289829 protein_coding
  ENST00000527613 BCLAF1-008 136258593-136289795 nonsense_mediated_decay
  ENST00000527759 BCLAF1-006 136259691-136289795 protein_coding
  ENST00000528229 BCLAF1-016 136279483-136289787 retained_intron
  ENST00000529522 BCLAF1-014 136260746-136268671 retained_intron
  ENST00000529826 BCLAF1-001 136269476-136289844 protein_coding
  ENST00000529917 BCLAF1-012 136261004-136269959 processed_transcript
  ENST00000530429 BCLAF1-009 136260902-136289784 nonsense_mediated_decay
  ENST00000530767 BCLAF1-010 136259351-136289781 protein_coding
  ENST00000531224 BCLAF1-003 136256863-136289851 protein_coding
  ENST00000532076 BCLAF1-018 136269262-136273144 retained_intron
  ENST00000532384 BCLAF1-002 136260895-136289841 nonsense_mediated_decay
  ENST00000533422 BCLAF1-021 136258294-136268322 nonsense_mediated_decay
  ENST00000533621 BCLAF1-017 136275555-136278103 nonsense_mediated_decay
  ENST00000534269 BCLAF1-007 136259696-136289795 nonsense_mediated_decay
  ENST00000534321 BCLAF1-013 136269089-136269740 retained_intron
  ENST00000534762 BCLAF1-020 136260928-136269520 protein_coding
  ENST00000534792 BCLAF1-019 136269231-136273166 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392348ENST00000526228ENST00000527536ENST00000527613ENST00000527759ENST00000529826ENST00000530767ENST00000531224ENST00000534269ENST00000534762ENST00000534792
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392348 N/A N/A N/A N/A N/A 5.024±0.00 N/A 3.667±0.00 N/A N/A N/A N/A N/A N/A
ENST00000526228 N/A N/A 13.911±0.00 N/A N/A N/A 6.026±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000527536 2.371±0.00 3.980±0.00 2.037±0.00 7.021±0.00 2.300±0.00 3.950±0.62 3.777±0.00 5.189±2.32 2.397±0.00 2.076±0.00 2.336±0.00 5.015±0.44 4.265±0.69 6.035±0.95
ENST00000527613 5.234±0.00 5.988±0.00 1.662±0.00 5.064±1.12 3.746±0.62 3.397±0.00 2.426±1.83 4.079±0.00 3.399±2.30 5.123±0.50 3.647±0.00 6.957±3.37 3.490±2.21 9.585±2.05
ENST00000527759 N/A N/A N/A N/A N/A N/A 0.731±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000529826 N/A N/A 3.141±0.00 N/A 4.705±0.00 N/A 1.925±0.00 N/A 7.651±0.00 N/A 1.398±0.00 N/A N/A N/A
ENST00000530767 N/A N/A N/A N/A N/A 3.524±0.00 0.954±0.00 N/A N/A 5.579±0.00 2.209±0.00 N/A N/A N/A
ENST00000531224 1.052±0.00 N/A N/A 4.105±0.42 2.081±0.00 N/A 0.887±0.00 1.418±0.00 N/A 3.984±0.00 N/A 5.427±0.00 0.780±0.15 N/A
ENST00000534269 N/A N/A N/A N/A 2.934±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.281±0.00 N/A
ENST00000534792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.060±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0001 VISTA 6:135802414-136405223

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006915 TAS apoptotic process
GO:0043065 IDA positive regulation of apoptotic process
GO:0043620 IMP regulation of DNA-templated transcription in response to stress
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:2000144 IMP positive regulation of DNA-templated transcription, initiation
GO:2001022 IMP positive regulation of response to DNA damage stimulus
GO:2001244 IMP positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000037608 Bclaf1 BCL2-associated transcription factor 1 protein_coding Mus_musculus

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