C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sperm associated antigen 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000061656 SPAG4 9606 + 20:35615892-35621049 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374273 SPAG4-001 35615892-35621049 protein_coding
  ENST00000430878 SPAG4-007 35619585-35621049 protein_coding
  ENST00000454819 SPAG4-002 35617024-35619688 protein_coding
  ENST00000462896 SPAG4-006 35617024-35618852 processed_transcript
  ENST00000463973 SPAG4-003 35616880-35618896 retained_intron
  ENST00000468248 SPAG4-004 35617046-35619736 retained_intron
  ENST00000498203 SPAG4-005 35617689-35620934 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374273ENST00000430878ENST00000454819ENST00000462896ENST00000463973ENST00000468248ENST00000498203
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374273 N/A N/A N/A 0.613±0.00 N/A N/A 0.517±0.40 0.350±0.00 1.362±0.00 0.289±0.00 1.232±0.43 0.972±0.00 4.508±0.79
ENST00000430878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.420±0.00 N/A N/A
ENST00000454819 0.477±0.00 N/A 0.723±0.00 0.617±0.21 0.237±0.00 N/A 0.610±0.00 N/A N/A 0.356±0.00 3.944±0.00 1.120±0.46 8.300±5.66
ENST00000462896 N/A N/A N/A N/A N/A N/A N/A N/A 0.637±0.00 N/A N/A N/A N/A
ENST00000463973 N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A 0.127±0.00 0.749±0.00 N/A N/A
ENST00000468248 0.586±0.00 4.465±0.00 0.262±0.00 N/A 0.052±0.00 N/A N/A N/A N/A N/A 0.590±0.00 N/A N/A
ENST00000498203 N/A 4.751±0.00 0.879±0.00 N/A 0.530±0.00 0.424±0.00 1.047±0.00 N/A N/A N/A N/A 0.918±0.67 2.448±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0001 VISTA 20:35018152-35620688
CIL_0005FU CIL_0005FU_0001 CGP 20:35615892-35664956

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 TAS structural molecule activity
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007283 TAS spermatogenesis
GO:0016021 IEA integral component of membrane
GO:0031514 IEA motile cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000038180 Spag4 sperm associated antigen 4 protein_coding Mus_musculus

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