C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transportin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064419 TNPO3 9606 - 7:128954180-129055144 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265388 TNPO3-001 128954180-129054914 protein_coding
  ENST00000471166 TNPO3-005 128957223-129054883 protein_coding
  ENST00000471234 TNPO3-003 128955088-129055144 protein_coding
  ENST00000482320 TNPO3-002 128955088-129055093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265388ENST00000471166ENST00000471234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265388 10.270±0.00 8.768±0.00 N/A 4.354±3.49 9.092±0.00 5.528±4.77 4.755±3.26 7.572±5.29 5.598±0.40 3.770±0.70 9.655±7.85 9.167±4.01 6.620±0.22 14.525±2.46
ENST00000471166 N/A N/A N/A 1.606±0.00 2.063±0.00 N/A 1.221±0.00 N/A N/A N/A 2.484±0.00 4.543±0.00 2.830±0.00 N/A
ENST00000471234 N/A N/A 2.095±0.00 N/A 3.621±0.00 N/A N/A N/A N/A 1.059±0.00 N/A 8.502±0.00 3.977±0.00 18.528±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YB CIL_0001YB_0001 CGP 7:128937612-129055144
CIL_0001YG CIL_0001YG_0001 CGP 7:128954180-129169697

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 TAS receptor activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006810 IEA transport
GO:0035048 IDA splicing factor protein import into nucleus
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045680 tnpo3 transportin 3 protein_coding Danio_rerio
ENSMUSG00000012535 Tnpo3 transportin 3 protein_coding Mus_musculus

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