C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transportin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000482320  |
TNPO3-002 |
ENSG00000064419 |
9606 | - |
7:128955088-129055093  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001YB | CIL_0001YB_0001 | CGP | 7:128937612-129055144 |
| CIL_0001YG | CIL_0001YG_0001 | CGP | 7:128954180-129169697 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005488 | IEA | binding |
| GO:0005634 | IEA | nucleus |
| GO:0006810 | IEA | transport |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000170350
|
Tnpo3-002 | nonsense_mediated_decay | Mus_musculus | 0 | 4440 |
|
ENSMUST00000012679
|
Tnpo3-001 | protein_coding | Mus_musculus | 0 | 3864 |
|
ENSMUST00000115251
|
Tnpo3-201 | protein_coding | Mus_musculus | 0 | 3781 |
|
ENSMUST00000169302
|
Tnpo3-007 | retained_intron | Mus_musculus | 0 | 2093 |
|
ENSMUST00000170647
|
Tnpo3-005 | protein_coding | Mus_musculus | 0 | 1218 |
|
ENSMUST00000170634
|
Tnpo3-009 | retained_intron | Mus_musculus | 0 | 754 |
|
ENSMUST00000164325
|
Tnpo3-008 | retained_intron | Mus_musculus | 0 | 555 |
|
ENSMUST00000171865
|
Tnpo3-006 | retained_intron | Mus_musculus | 0 | 309 |
|
ENSMUST00000167252
|
Irf5-004 | protein_coding | Mus_musculus | 0 | 279 |
|
ENSMUST00000171527
|
Irf5-005 | processed_transcript | Mus_musculus | 0 | 261 |
|
ENSMUST00000166844
|
Tnpo3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 244 |
