C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000069018 TRPC7 9606 - 5:136213320-136365537 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352189 TRPC7-003 136213435-136365254 protein_coding
  ENST00000378459 TRPC7-005 136213435-136365254 protein_coding
  ENST00000502753 TRPC7-006 136213435-136365254 protein_coding
  ENST00000503275 TRPC7-002 136213435-136365254 nonsense_mediated_decay
  ENST00000509288 TRPC7-007 136213349-136226437 retained_intron
  ENST00000513104 TRPC7-001 136213320-136365537 protein_coding
  ENST00000514963 TRPC7-004 136213435-136365254 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonTestisENST00000378459ENST00000503275ENST00000509288ENST00000513104ENST00000514963
Transcript ID Bladder Brain Colon Testis
ENST00000378459 N/A 0.059±0.00 N/A N/A
ENST00000503275 0.115±0.00 N/A N/A N/A
ENST00000509288 0.315±0.00 N/A 0.277±0.00 0.963±0.00
ENST00000513104 N/A N/A N/A 0.030±0.00
ENST00000514963 N/A N/A N/A 0.162±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P3 CIL_0005P3_0001 CGP 5:136132845-136365537
CIL_0005P0 CIL_0005P0_0001 CGP 5:136213320-137598379

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005801 IEA cis-Golgi network
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0006828 IEA manganese ion transport
GO:0007411 TAS axon guidance
GO:0007596 TAS blood coagulation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030168 TAS platelet activation
GO:0034220 TAS ion transmembrane transport
GO:0048471 IEA perinuclear region of cytoplasm
GO:0055085 IEA transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027523 TRPC7 (1 of 3) transient receptor potential cation channel, subfamily C, member 7 protein_coding Danio_rerio
ENSDARG00000037660 TRPC7 (2 of 3) transient receptor potential cation channel, subfamily C, member 7 protein_coding Danio_rerio
ENSDARG00000079469 TRPC7 (3 of 3) transient receptor potential cation channel, subfamily C, member 7 protein_coding Danio_rerio
ENSMUSG00000021541 Trpc7 transient receptor potential cation channel, subfamily C, member 7 protein_coding Mus_musculus

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