C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513104 TRPC7-001 ENSG00000069018 9606 - 5:136213320-136365537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000513104
Transcript ID Testis
ENST00000513104 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P3 CIL_0005P3_0001 CGP 5:136132845-136365537
CIL_0005P0 CIL_0005P0_0001 CGP 5:136213320-137598379

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005801 IEA cis-Golgi network
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0006828 IEA manganese ion transport
GO:0007411 TAS axon guidance
GO:0007596 TAS blood coagulation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030168 TAS platelet activation
GO:0034220 TAS ion transmembrane transport
GO:0048471 IEA perinuclear region of cytoplasm
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109871 Trpc7-002 protein_coding Mus_musculus 0 3578
ENSMUST00000022023 Trpc7-001 protein_coding Mus_musculus 0 3542
ENSMUST00000173466 Trpc7-009 nonsense_mediated_decay Mus_musculus 0 3350
ENSMUST00000173817 Trpc7-006 protein_coding Mus_musculus 0 2061
ENSMUST00000151918 Trpc7-003 nonsense_mediated_decay Mus_musculus 0 1829
ENSMUST00000173513 Trpc7-008 protein_coding Mus_musculus 0 1768
ENSMUST00000174457 Trpc7-004 protein_coding Mus_musculus 0 1768
ENSMUST00000173067 Trpc7-005 nonsense_mediated_decay Mus_musculus 0 1498
ENSMUST00000029271 Trpc3-001 protein_coding Mus_musculus 0 1243
ENSMUST00000146475 Trpc3-002 processed_transcript Mus_musculus 0 551

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