C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DiGeorge syndrome critical region gene 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070413 DGCR2 9606 - 22:19036282-19122454 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263196 DGCR2-001 19036286-19122454 protein_coding
  ENST00000389262 DGCR2-002 19036286-19122407 nonsense_mediated_decay
  ENST00000467659 DGCR2-003 19037837-19057053 retained_intron
  ENST00000473832 DGCR2-004 19056994-19065904 processed_transcript
  ENST00000537045 DGCR2-201 19036282-19122454 protein_coding
  ENST00000545799 DGCR2-202 19036282-19122454 protein_coding
  ENST00000608548 DGCR2-005 19048379-19063277 processed_transcript
  ENST00000615747 DGCR2-203 19046745-19122454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263196ENST00000389262ENST00000467659ENST00000537045ENST00000545799
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263196 15.871±0.00 12.464±0.00 0.891±0.00 11.033±4.66 11.245±8.25 6.548±3.05 7.443±6.02 6.883±4.97 1.731±0.44 11.517±0.00 8.066±0.00 21.198±13.50 20.749±1.41 17.006±3.06
ENST00000389262 N/A N/A 0.649±0.00 1.111±0.00 0.714±0.00 N/A N/A N/A 0.883±0.00 0.717±0.00 0.485±0.00 N/A N/A N/A
ENST00000467659 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.728±0.00 N/A N/A N/A N/A
ENST00000537045 N/A 4.947±0.00 N/A 8.632±0.00 N/A 6.160±0.00 N/A 8.659±0.00 7.141±0.00 1.555±0.00 3.352±0.93 5.878±0.00 N/A 8.124±0.00
ENST00000545799 N/A N/A N/A N/A N/A N/A N/A 0.989±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KV CIL_0003KV_0002 CGP 22:19036282-19144684

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007155 IEA cell adhesion
GO:0009887 TAS organ morphogenesis
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0050890 IMP cognition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042962 dgcr2 DiGeorge syndrome critical region gene 2 protein_coding Danio_rerio
ENSMUSG00000003166 Dgcr2 DiGeorge syndrome critical region gene 2 protein_coding Mus_musculus
ENSMUSG00000092470 Gm20518 predicted gene 20518 protein_coding Mus_musculus

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