C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389262 DGCR2-002 ENSG00000070413 9606 - 22:19036286-19122407 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungMuscleENST00000389262
Transcript ID Bladder Brain Breast Liver Lung Muscle
ENST00000389262 0.649±0.00 1.111±0.00 0.714±0.00 0.883±0.00 0.717±0.00 0.485±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KV CIL_0003KV_0002 CGP 22:19036282-19144684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117082 Dgcr2-001 protein_coding Mus_musculus 0 1186
ENSMUST00000012152 Dgcr2-004 protein_coding Mus_musculus 0 1186
ENSMUST00000117945 Dgcr2-002 protein_coding Mus_musculus 0 1186
ENSMUST00000135229 Dgcr2-005 retained_intron Mus_musculus 0 1186
ENSMUST00000150068 Gm20518-001 nonsense_mediated_decay Mus_musculus 0 1160
ENSMUST00000066127 Dgcr2-003 protein_coding Mus_musculus 0 791
ENSMUST00000155611 Dgcr2-006 retained_intron Mus_musculus 0 750
ENSMUST00000155943 Dgcr2-008 processed_transcript Mus_musculus 0 616

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