C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD4 binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511480 N4BP2-002 ENSG00000078177 9606 + 4:40056913-40158251 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryPlacentaTestisENST00000511480
Transcript ID Brain Breast Colon Ovary Placenta Testis
ENST00000511480 0.384±0.00 0.603±0.00 0.508±0.00 0.217±0.13 0.448±0.00 0.364±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TY CIL_0002TY_0002 CGP 4:39822863-40158252
CIL_0005LM CIL_0005LM_0002 CGP 4:40056826-40246967

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113738 N4bp2-001 protein_coding Mus_musculus 0 2093
ENSMUST00000087264 N4bp2-201 protein_coding Mus_musculus 0 2071
ENSMUST00000138239 N4bp2-002 protein_coding Mus_musculus 0 1452
ENSMUST00000127411 N4bp2-005 retained_intron Mus_musculus 0 372
ENSMUST00000136674 N4bp2-006 retained_intron Mus_musculus 0 257
ENSMUST00000137190 N4bp2-003 processed_transcript Mus_musculus 0 237

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