C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD4 binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261435 N4BP2-001 ENSG00000078177 9606 + 4:40056826-40158252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261435
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261435 0.274±0.00 0.158±0.00 0.048±0.00 0.505±0.05 1.292±0.00 0.291±0.01 0.796±0.72 0.495±0.38 2.066±0.00 0.390±0.00 0.569±0.29 0.593±0.51 0.812±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TY CIL_0002TY_0002 CGP 4:39822863-40158252
CIL_0005LM CIL_0005LM_0002 CGP 4:40056826-40246967

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004519 IDA endonuclease activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IDA ATP binding
GO:0005829 IEA cytosol
GO:0016310 IDA phosphorylation
GO:0046404 IDA ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113738 N4bp2-001 protein_coding Mus_musculus 0 2093
ENSMUST00000087264 N4bp2-201 protein_coding Mus_musculus 0 2071
ENSMUST00000138239 N4bp2-002 protein_coding Mus_musculus 0 1452
ENSMUST00000127411 N4bp2-005 retained_intron Mus_musculus 0 372
ENSMUST00000136674 N4bp2-006 retained_intron Mus_musculus 0 257
ENSMUST00000137190 N4bp2-003 processed_transcript Mus_musculus 0 237

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