C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin T2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000082258 CCNT2 9606 + 2:134918235-134959342 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264157 CCNT2-001 134918825-134959342 protein_coding
  ENST00000295238 CCNT2-002 134918825-134957017 protein_coding
  ENST00000417175 CCNT2-009 134918847-134946214 nonsense_mediated_decay
  ENST00000419781 CCNT2-004 134918235-134956843 nonsense_mediated_decay
  ENST00000438691 CCNT2-005 134947826-134953198 protein_coding
  ENST00000446247 CCNT2-007 134918241-134953325 protein_coding
  ENST00000452521 CCNT2-010 134947730-134954838 protein_coding
  ENST00000452839 CCNT2-006 134918822-134954799 nonsense_mediated_decay
  ENST00000464932 CCNT2-003 134918843-134920362 retained_intron
  ENST00000475094 CCNT2-008 134918837-134942769 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264157ENST00000295238ENST00000419781ENST00000452839
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264157 N/A N/A N/A 0.618±0.00 N/A 0.229±0.00 0.301±0.00 1.779±0.00 1.079±0.00 1.002±0.36 N/A 1.532±0.19 0.429±0.03 1.022±0.00
ENST00000295238 1.865±0.00 4.862±0.00 1.301±0.00 2.485±0.56 2.333±0.00 1.943±0.17 1.424±0.28 3.685±0.00 2.269±0.46 2.366±0.40 0.823±0.33 4.352±2.37 1.437±0.55 5.720±1.47
ENST00000419781 N/A N/A 1.504±0.00 1.267±0.00 3.462±0.00 3.470±0.00 0.964±0.31 2.004±0.00 3.206±0.00 0.863±0.21 0.560±0.36 3.016±1.85 0.403±0.04 5.509±0.00
ENST00000452839 N/A N/A N/A 1.987±0.00 2.203±0.00 N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IZ CIL_0001IZ_0001 CGP 2:134838547-134959342
CIL_0006VR CIL_0006VR_0001 CGP 2:134918235-135047468

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 TAS transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0007049 IEA cell cycle
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0019901 IEA protein kinase binding
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036510 ccnt2b cyclin T2b protein_coding Danio_rerio
ENSDARG00000036685 ccnt2a cyclin T2a protein_coding Danio_rerio
ENSMUSG00000026349 Ccnt2 cyclin T2 protein_coding Mus_musculus

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