C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin T2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026349 Ccnt2 10090 + 1:127774164-127808061 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027587 Ccnt2-001 127774164-127808061 protein_coding
  ENSMUST00000112570 Ccnt2-002 127774164-127805932 protein_coding
  ENSMUST00000125760 Ccnt2-006 127774164-127793589 retained_intron
  ENSMUST00000126850 Ccnt2-004 127774164-127795800 retained_intron
  ENSMUST00000143513 Ccnt2-007 127774164-127798401 retained_intron
  ENSMUST00000149760 Ccnt2-003 127774164-127795800 retained_intron
  ENSMUST00000153359 Ccnt2-005 127796571-127808061 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027587ENSMUST00000112570ENSMUST00000143513ENSMUST00000153359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027587 N/A 1.761±0.59 7.269±1.33 10.655±5.84 4.357±1.08 2.369±0.99 1.870±0.91 2.294±0.64 2.960±1.98 3.416±0.41 1.762±0.23 2.417±0.77 2.389±0.00 0.424±0.28
ENSMUST00000112570 4.788±0.78 3.239±0.83 6.467±0.36 3.464±1.29 5.044±0.63 5.189±1.60 2.768±0.72 2.458±0.82 4.105±2.73 6.259±1.68 2.135±0.27 7.535±2.23 6.058±0.53 1.792±0.67
ENSMUST00000143513 9.992±0.00 7.137±0.56 N/A N/A 8.415±0.80 7.784±0.00 N/A N/A 3.498±0.00 N/A N/A N/A N/A 3.232±0.00
ENSMUST00000153359 3.063±0.73 2.351±0.48 3.640±0.18 6.350±0.00 3.343±0.37 2.633±0.59 1.421±0.09 1.748±0.41 2.659±1.37 4.125±1.02 1.956±0.36 2.999±0.99 1.732±0.16 0.805±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T0 CIL_0007T0_0002 VISTA 1:127230775-127832241
CIL_0001IZ CIL_0001IZ_0002 CGP 1:127729413-127808061
CIL_0006VR CIL_0006VR_0002 CGP 1:127774164-127840321

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005634 ISO nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036510 ccnt2b cyclin T2b protein_coding Danio_rerio
ENSDARG00000036685 ccnt2a cyclin T2a protein_coding Danio_rerio
ENSG00000082258 CCNT2 cyclin T2 protein_coding Homo_sapiens

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