C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006VR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000082258-ENSG00000176601 CGP 9606 2:134918235-135047468
GeneTranscriptPositionBiotype
ENSG00000082258 (CCNT2)
cyclin T2 		ENST00000264157 (CCNT2-001) 134918825-134959342 protein_coding
ENST00000295238 (CCNT2-002) 134918825-134957017 protein_coding
ENST00000417175 (CCNT2-009) 134918847-134946214 nonsense_mediated_decay
ENST00000419781 (CCNT2-004) 134918235-134956843 nonsense_mediated_decay
ENST00000438691 (CCNT2-005) 134947826-134953198 protein_coding
ENST00000446247 (CCNT2-007) 134918241-134953325 protein_coding
ENST00000452521 (CCNT2-010) 134947730-134954838 protein_coding
ENST00000452839 (CCNT2-006) 134918822-134954799 nonsense_mediated_decay
ENST00000464932 (CCNT2-003) 134918843-134920362 retained_intron
ENST00000475094 (CCNT2-008) 134918837-134942769 retained_intron
ENSG00000176601 (MAP3K19)
mitogen-activated protein kinase kinase kinase 19 		ENST00000358371 (MAP3K19-002) 134964810-135024678 protein_coding
ENST00000375844 (MAP3K19-003) 134964810-135024678 protein_coding
ENST00000375845 (MAP3K19-001) 134964491-135024678 protein_coding
ENST00000392915 (MAP3K19-006) 134980714-135023649 protein_coding
ENST00000392917 (MAP3K19-201) 134964499-135024678 protein_coding
ENST00000392918 (MAP3K19-004) 134964810-135024678 protein_coding
ENST00000414343 (MAP3K19-011) 135005521-135047458 protein_coding
ENST00000425952 (MAP3K19-009) 134998921-135023376 protein_coding
ENST00000437365 (MAP3K19-007) 134980716-134987041 protein_coding
ENST00000468155 (MAP3K19-010) 134991341-135047468 retained_intron
ENST00000478805 (MAP3K19-008) 134980714-134983479 retained_intron
ENST00000486077 (MAP3K19-012) 135030352-135047443 processed_transcript
CIL_0006VR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026349-ENSMUSG00000051590 CGP 10090 1:127774164-127840321
GeneTranscriptPositionBiotype
ENSMUSG00000026349 (Ccnt2)
cyclin T2 		ENSMUST00000027587 (Ccnt2-001) 127774164-127808061 protein_coding
ENSMUST00000112570 (Ccnt2-002) 127774164-127805932 protein_coding
ENSMUST00000125760 (Ccnt2-006) 127774164-127793589 retained_intron
ENSMUST00000126850 (Ccnt2-004) 127774164-127795800 retained_intron
ENSMUST00000143513 (Ccnt2-007) 127774164-127798401 retained_intron
ENSMUST00000149760 (Ccnt2-003) 127774164-127795800 retained_intron
ENSMUST00000153359 (Ccnt2-005) 127796571-127808061 processed_transcript
ENSMUSG00000051590 (Map3k19)
mitogen-activated protein kinase kinase kinase 19 		ENSMUST00000061512 (Map3k19-001) 127815271-127840321 protein_coding
ENSMUST00000187653 (Map3k19-004) 127815253-127840321 protein_coding
ENSMUST00000189398 (Map3k19-002) 127815262-127840321 protein_coding
ENSMUST00000191333 (Map3k19-003) 127815262-127840321 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VR_0001ENSG00000082258ENST00000264157ENST00000295238ENST00000417175ENST00000419781ENST00000438691ENST00000446247ENST00000452521ENST00000452839ENST00000464932ENST00000475094ENSG00000176601ENST00000358371ENST00000375844ENST00000375845ENST00000392915ENST00000392917ENST00000392918ENST00000414343ENST00000425952ENST00000437365ENST00000468155ENST00000478805ENST00000486077CIL_0006VR_0002ENSMUSG00000026349ENSMUST00000027587ENSMUST00000112570ENSMUST00000125760ENSMUST00000126850ENSMUST00000143513ENSMUST00000149760ENSMUST00000153359ENSMUSG00000051590ENSMUST00000061512ENSMUST00000187653ENSMUST00000189398ENSMUST00000191333
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VR_0001ENSG00000082258ENST00000264157ENST00000295238ENST00000419781ENST00000452839ENSG00000176601ENST00000358371ENST00000375844ENST00000375845ENST00000392917ENST00000392918ENST00000437365ENST00000468155ENST00000478805CIL_0006VR_0002ENSMUSG00000026349ENSMUST00000027587ENSMUST00000112570ENSMUST00000143513ENSMUST00000153359ENSMUSG00000051590ENSMUST00000061512ENSMUST00000187653ENSMUST00000189398ENSMUST00000191333
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000082258 ENST00000264157 N/A N/A N/A 0.618±0.00 N/A 0.229±0.00 0.301±0.00 1.779±0.00 1.079±0.00 1.002±0.36 N/A 1.532±0.19 0.429±0.03 1.022±0.00
ENST00000295238 1.865±0.00 4.862±0.00 1.301±0.00 2.485±0.56 2.333±0.00 1.943±0.17 1.424±0.28 3.685±0.00 2.269±0.46 2.366±0.40 0.823±0.33 4.352±2.37 1.437±0.55 5.720±1.47
ENST00000417175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419781 N/A N/A 1.504±0.00 1.267±0.00 3.462±0.00 3.470±0.00 0.964±0.31 2.004±0.00 3.206±0.00 0.863±0.21 0.560±0.36 3.016±1.85 0.403±0.04 5.509±0.00
ENST00000438691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452839 N/A N/A N/A 1.987±0.00 2.203±0.00 N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A
ENST00000464932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176601 ENST00000358371 N/A N/A N/A N/A 0.024±0.01 N/A N/A N/A N/A 0.381±0.00 0.042±0.00 N/A N/A N/A
ENST00000375844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A
ENST00000375845 N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A 0.376±0.36 N/A N/A
ENST00000392915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392917 N/A 0.056±0.00 0.087±0.00 0.237±0.00 N/A N/A 0.046±0.03 0.027±0.00 N/A N/A N/A N/A N/A N/A
ENST00000392918 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.01 N/A N/A
ENST00000414343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437365 N/A N/A N/A N/A 0.005±0.00 N/A 0.009±0.00 0.072±0.00 N/A 0.390±0.00 N/A N/A N/A 0.898±0.00
ENST00000468155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A
ENST00000478805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A 2.704±0.00
ENST00000486077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026349 ENSMUST00000027587 N/A 1.761±0.59 7.269±1.33 10.655±5.84 4.357±1.08 2.369±0.99 1.870±0.91 2.294±0.64 2.960±1.98 3.416±0.41 1.762±0.23 2.417±0.77 2.389±0.00 0.424±0.28
ENSMUST00000112570 4.788±0.78 3.239±0.83 6.467±0.36 3.464±1.29 5.044±0.63 5.189±1.60 2.768±0.72 2.458±0.82 4.105±2.73 6.259±1.68 2.135±0.27 7.535±2.23 6.058±0.53 1.792±0.67
ENSMUST00000125760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143513 9.992±0.00 7.137±0.56 N/A N/A 8.415±0.80 7.784±0.00 N/A N/A 3.498±0.00 N/A N/A N/A N/A 3.232±0.00
ENSMUST00000149760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153359 3.063±0.73 2.351±0.48 3.640±0.18 6.350±0.00 3.343±0.37 2.633±0.59 1.421±0.09 1.748±0.41 2.659±1.37 4.125±1.02 1.956±0.36 2.999±0.99 1.732±0.16 0.805±0.28
ENSMUSG00000051590 ENSMUST00000061512 0.050±0.00 0.032±0.01 N/A 0.070±0.03 0.305±0.00 0.030±0.00 0.038±0.00 N/A 0.019±0.01 0.512±0.00 N/A 0.640±0.42 N/A N/A
ENSMUST00000187653 0.082±0.00 0.049±0.00 0.026±0.00 0.327±0.28 N/A 0.056±0.00 0.027±0.00 0.030±0.01 0.003±0.00 0.122±0.00 0.020±0.01 0.483±0.20 0.012±0.00 0.019±0.01
ENSMUST00000189398 0.070±0.00 0.108±0.08 N/A N/A 0.610±0.15 0.092±0.07 0.066±0.05 0.058±0.03 0.037±0.03 0.805±0.23 0.017±0.00 0.885±0.33 0.012±0.00 N/A
ENSMUST00000191333 0.129±0.00 N/A 0.021±0.00 N/A 0.250±0.01 0.217±0.10 0.186±0.00 0.060±0.00 N/A N/A N/A 1.385±0.13 N/A N/A

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