C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001IZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153086-ENSG00000082258 CGP 9606 2:134838547-134959342
GeneTranscriptPositionBiotype
ENSG00000082258 (CCNT2)
cyclin T2 		ENST00000264157 (CCNT2-001) 134918825-134959342 protein_coding
ENST00000295238 (CCNT2-002) 134918825-134957017 protein_coding
ENST00000417175 (CCNT2-009) 134918847-134946214 nonsense_mediated_decay
ENST00000419781 (CCNT2-004) 134918235-134956843 nonsense_mediated_decay
ENST00000438691 (CCNT2-005) 134947826-134953198 protein_coding
ENST00000446247 (CCNT2-007) 134918241-134953325 protein_coding
ENST00000452521 (CCNT2-010) 134947730-134954838 protein_coding
ENST00000452839 (CCNT2-006) 134918822-134954799 nonsense_mediated_decay
ENST00000464932 (CCNT2-003) 134918843-134920362 retained_intron
ENST00000475094 (CCNT2-008) 134918837-134942769 retained_intron
ENSG00000153086 (ACMSD)
aminocarboxymuconate semialdehyde decarboxylase 		ENST00000356140 (ACMSD-001) 134838547-134902034 protein_coding
ENST00000392928 (ACMSD-002) 134838618-134902034 protein_coding
ENST00000485893 (ACMSD-003) 134838616-134873661 retained_intron
ENST00000498093 (ACMSD-004) 134844423-134859694 retained_intron
CIL_0001IZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026348-ENSMUSG00000026349 CGP 10090 1:127729413-127808061
GeneTranscriptPositionBiotype
ENSMUSG00000026348 (Acmsd)
amino carboxymuconate semialdehyde decarboxylase 		ENSMUST00000038006 (Acmsd-001) 127729413-127767978 protein_coding
ENSMUST00000186537 (Acmsd-002) 127756757-127767978 processed_transcript
ENSMUSG00000026349 (Ccnt2)
cyclin T2 		ENSMUST00000027587 (Ccnt2-001) 127774164-127808061 protein_coding
ENSMUST00000112570 (Ccnt2-002) 127774164-127805932 protein_coding
ENSMUST00000125760 (Ccnt2-006) 127774164-127793589 retained_intron
ENSMUST00000126850 (Ccnt2-004) 127774164-127795800 retained_intron
ENSMUST00000143513 (Ccnt2-007) 127774164-127798401 retained_intron
ENSMUST00000149760 (Ccnt2-003) 127774164-127795800 retained_intron
ENSMUST00000153359 (Ccnt2-005) 127796571-127808061 processed_transcript
ENSMUSG00000102014 (RP24-137J17.2)
RIKEN cDNA 2900009J06 gene 		ENSMUST00000185310 (RP24-137J17.2-002) 127753616-127774092 antisense
ENSMUST00000188163 (RP24-137J17.2-001) 127753616-127774054 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IZ_0001ENSG00000082258ENST00000264157ENST00000295238ENST00000417175ENST00000419781ENST00000438691ENST00000446247ENST00000452521ENST00000452839ENST00000464932ENST00000475094ENSG00000153086ENST00000356140ENST00000392928ENST00000485893ENST00000498093CIL_0001IZ_0002ENSMUSG00000026348ENSMUST00000038006ENSMUST00000186537ENSMUSG00000026349ENSMUST00000027587ENSMUST00000112570ENSMUST00000125760ENSMUST00000126850ENSMUST00000143513ENSMUST00000149760ENSMUST00000153359ENSMUSG00000102014ENSMUST00000185310ENSMUST00000188163
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IZ_0001ENSG00000082258ENST00000264157ENST00000295238ENST00000419781ENST00000452839ENSG00000153086ENST00000356140ENST00000392928ENST00000485893CIL_0001IZ_0002ENSMUSG00000026348ENSMUST00000038006ENSMUST00000186537ENSMUSG00000026349ENSMUST00000027587ENSMUST00000112570ENSMUST00000143513ENSMUST00000153359ENSMUSG00000102014ENSMUST00000185310ENSMUST00000188163
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000082258 ENST00000264157 N/A N/A N/A 0.618±0.00 N/A 0.229±0.00 0.301±0.00 1.779±0.00 1.079±0.00 1.002±0.36 N/A 1.532±0.19 0.429±0.03 1.022±0.00
ENST00000295238 1.865±0.00 4.862±0.00 1.301±0.00 2.485±0.56 2.333±0.00 1.943±0.17 1.424±0.28 3.685±0.00 2.269±0.46 2.366±0.40 0.823±0.33 4.352±2.37 1.437±0.55 5.720±1.47
ENST00000417175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419781 N/A N/A 1.504±0.00 1.267±0.00 3.462±0.00 3.470±0.00 0.964±0.31 2.004±0.00 3.206±0.00 0.863±0.21 0.560±0.36 3.016±1.85 0.403±0.04 5.509±0.00
ENST00000438691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452839 N/A N/A N/A 1.987±0.00 2.203±0.00 N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A
ENST00000464932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153086 ENST00000356140 N/A N/A 3.239±0.00 N/A N/A N/A N/A 9.990±0.00 11.672±0.00 N/A N/A N/A N/A N/A
ENST00000392928 N/A N/A 5.730±0.00 N/A N/A N/A N/A 11.979±2.41 10.656±0.00 N/A N/A N/A N/A N/A
ENST00000485893 N/A N/A 2.019±0.00 N/A N/A N/A N/A 5.202±0.00 N/A N/A N/A N/A N/A N/A
ENST00000498093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026348 ENSMUST00000038006 N/A N/A N/A N/A N/A N/A N/A 48.479±2.62 4.676±1.79 0.057±0.00 N/A N/A N/A 0.061±0.03
ENSMUST00000186537 0.091±0.01 0.156±0.00 0.043±0.00 0.089±0.02 0.105±0.05 0.141±0.07 0.088±0.07 N/A 3.657±1.82 0.061±0.01 0.027±0.01 0.083±0.04 0.192±0.09 0.043±0.00
ENSMUSG00000026349 ENSMUST00000027587 N/A 1.761±0.59 7.269±1.33 10.655±5.84 4.357±1.08 2.369±0.99 1.870±0.91 2.294±0.64 2.960±1.98 3.416±0.41 1.762±0.23 2.417±0.77 2.389±0.00 0.424±0.28
ENSMUST00000112570 4.788±0.78 3.239±0.83 6.467±0.36 3.464±1.29 5.044±0.63 5.189±1.60 2.768±0.72 2.458±0.82 4.105±2.73 6.259±1.68 2.135±0.27 7.535±2.23 6.058±0.53 1.792±0.67
ENSMUST00000125760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143513 9.992±0.00 7.137±0.56 N/A N/A 8.415±0.80 7.784±0.00 N/A N/A 3.498±0.00 N/A N/A N/A N/A 3.232±0.00
ENSMUST00000149760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153359 3.063±0.73 2.351±0.48 3.640±0.18 6.350±0.00 3.343±0.37 2.633±0.59 1.421±0.09 1.748±0.41 2.659±1.37 4.125±1.02 1.956±0.36 2.999±0.99 1.732±0.16 0.805±0.28
ENSMUSG00000102014 ENSMUST00000185310 0.082±0.00 0.369±0.00 0.189±0.05 0.259±0.00 N/A 0.107±0.00 N/A N/A N/A 0.186±0.00 0.314±0.07 0.242±0.00 N/A N/A
ENSMUST00000188163 0.353±0.04 0.173±0.00 0.618±0.08 1.317±0.63 0.213±0.08 N/A 0.252±0.12 N/A N/A 0.109±0.00 1.286±0.40 1.700±0.83 0.671±0.20 0.656±0.29

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