C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin T2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419781 CCNT2-004 ENSG00000082258 9606 + 2:134918235-134956843 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419781
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419781 1.504±0.00 1.267±0.00 3.462±0.00 3.470±0.00 0.964±0.31 2.004±0.00 3.206±0.00 0.863±0.21 0.560±0.36 3.016±1.85 0.403±0.04 5.509±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IZ CIL_0001IZ_0001 CGP 2:134838547-134959342
CIL_0006VR CIL_0006VR_0001 CGP 2:134918235-135047468

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153359 Ccnt2-005 processed_transcript Mus_musculus 0 3219
ENSMUST00000027587 Ccnt2-001 protein_coding Mus_musculus 0 2507
ENSMUST00000112570 Ccnt2-002 protein_coding Mus_musculus 0 1251
ENSMUST00000143513 Ccnt2-007 retained_intron Mus_musculus 0 808
ENSMUST00000149760 Ccnt2-003 retained_intron Mus_musculus 0 808
ENSMUST00000125760 Ccnt2-006 retained_intron Mus_musculus 0 701
ENSMUST00000126850 Ccnt2-004 retained_intron Mus_musculus 0 614
ENSDART00000143599 ccnt2b-002 protein_coding Danio_rerio 2e-21 110
ENSDART00000053282 ccnt2a-001 protein_coding Danio_rerio 3e-20 106

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