C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ERGIC and golgi 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000087502 ERGIC2 9606 - 12:29337352-29381189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360150 ERGIC2-001 29337352-29381153 protein_coding
  ENST00000546509 ERGIC2-006 29343245-29350068 nonsense_mediated_decay
  ENST00000546839 ERGIC2-002 29349145-29381150 protein_coding
  ENST00000548098 ERGIC2-008 29341033-29341865 retained_intron
  ENST00000548441 ERGIC2-007 29370114-29381181 protein_coding
  ENST00000548909 ERGIC2-009 29341018-29350068 protein_coding
  ENST00000549182 ERGIC2-010 29340857-29343282 nonsense_mediated_decay
  ENST00000550353 ERGIC2-011 29356382-29381175 protein_coding
  ENST00000551467 ERGIC2-005 29341020-29357668 protein_coding
  ENST00000552132 ERGIC2-003 29356428-29381189 protein_coding
  ENST00000552155 ERGIC2-004 29349101-29381161 protein_coding
  ENST00000611644 ERGIC2-201 29337356-29371661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360150ENST00000548909ENST00000549182ENST00000550353ENST00000551467ENST00000552155ENST00000611644
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360150 N/A 2.346±0.00 2.517±0.00 2.088±0.26 5.106±0.00 3.459±0.38 2.278±0.00 1.257±0.00 2.801±2.08 6.296±0.00 1.172±0.00 2.942±1.49 2.155±0.20 3.034±0.00
ENST00000548909 N/A N/A N/A N/A N/A N/A N/A N/A 4.916±0.00 7.106±0.00 N/A N/A N/A N/A
ENST00000549182 N/A N/A N/A N/A N/A N/A N/A N/A 6.899±0.00 7.894±0.00 N/A N/A N/A 18.767±0.00
ENST00000550353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.821±0.00 N/A 8.866±0.00 N/A
ENST00000551467 N/A N/A N/A N/A N/A N/A N/A 5.151±0.00 N/A N/A N/A 6.743±0.00 N/A N/A
ENST00000552155 N/A N/A N/A N/A N/A 14.775±0.00 N/A 5.170±0.00 N/A N/A N/A 14.153±3.06 16.720±0.00 35.396±0.00
ENST00000611644 2.510±0.00 N/A N/A N/A 2.251±0.00 N/A 3.313±0.00 3.792±0.00 0.946±0.00 2.105±0.00 1.729±0.00 1.502±0.00 2.588±0.00 3.517±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0001 CGP 12:28133249-29340980
CIL_0006HR CIL_0006HR_0001 CGP 12:29149103-29381189

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020224 ERGIC2 (1 of 2) ERGIC and golgi 2 protein_coding Danio_rerio
ENSDARG00000051936 ergic2 ERGIC and golgi 2 protein_coding Danio_rerio
ENSMUSG00000030304 Ergic2 ERGIC and golgi 2 protein_coding Mus_musculus

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