C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERGIC and golgi 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552155 ERGIC2-004 ENSG00000087502 9606 - 12:29349101-29381161 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyOvaryPlacentaTestisENST00000552155
Transcript ID Colon Kidney Ovary Placenta Testis
ENST00000552155 14.775±0.00 5.170±0.00 14.153±3.06 16.720±0.00 35.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0001 CGP 12:28133249-29340980
CIL_0006HR CIL_0006HR_0001 CGP 12:29149103-29381189

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032447 Ergic2-002 protein_coding Mus_musculus 0 734
ENSMUST00000136008 Ergic2-001 protein_coding Mus_musculus 0 734
ENSMUST00000130242 Ergic2-003 nonsense_mediated_decay Mus_musculus 0 492
ENSMUST00000125469 Ergic2-006 retained_intron Mus_musculus 0 320
ENSMUST00000032446 Ergic2-015 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000126773 Ergic2-012 retained_intron Mus_musculus 0 196
ENSMUST00000145162 Ergic2-010 processed_transcript Mus_musculus 9e-32 141
ENSMUST00000140311 Ergic2-009 retained_intron Mus_musculus 9e-32 141
ENSMUST00000134574 Ergic2-011 processed_transcript Mus_musculus 6e-24 115
ENSMUST00000149631 Ergic2-013 retained_intron Mus_musculus 6e-24 115

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