C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ERGIC and golgi 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550353 ERGIC2-011 ENSG00000087502 9606 - 12:29356382-29381175 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENST00000550353
Transcript ID Muscle Placenta
ENST00000550353 4.821±0.00 8.866±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0001 CGP 12:28133249-29340980
CIL_0006HR CIL_0006HR_0001 CGP 12:29149103-29381189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130242 Ergic2-003 nonsense_mediated_decay Mus_musculus 0 529
ENSMUST00000032447 Ergic2-002 protein_coding Mus_musculus 0 529
ENSMUST00000136008 Ergic2-001 protein_coding Mus_musculus 0 529
ENSMUST00000125469 Ergic2-006 retained_intron Mus_musculus 0 442
ENSMUST00000032446 Ergic2-015 nonsense_mediated_decay Mus_musculus 0 442
ENSMUST00000145162 Ergic2-010 processed_transcript Mus_musculus 0 265
ENSMUST00000140311 Ergic2-009 retained_intron Mus_musculus 0 265
ENSMUST00000126773 Ergic2-012 retained_intron Mus_musculus 0 265
ENSMUST00000150980 Ergic2-005 retained_intron Mus_musculus 0 257
ENSMUST00000126698 Ergic2-007 protein_coding Mus_musculus 0 257
ENSMUST00000134574 Ergic2-011 processed_transcript Mus_musculus 0.0000000004 69

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