C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ERGIC and golgi 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030304 Ergic2 10090 - 6:148179079-148212374 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032446 Ergic2-015 148181216-148212107 nonsense_mediated_decay
  ENSMUST00000032447 Ergic2-002 148183698-148212374 protein_coding
  ENSMUST00000125469 Ergic2-006 148195196-148202790 retained_intron
  ENSMUST00000126698 Ergic2-007 148201493-148212022 protein_coding
  ENSMUST00000126773 Ergic2-012 148181928-148196243 retained_intron
  ENSMUST00000130242 Ergic2-003 148189546-148212022 nonsense_mediated_decay
  ENSMUST00000132413 Ergic2-004 148202701-148212005 processed_transcript
  ENSMUST00000134574 Ergic2-011 148189500-148195241 processed_transcript
  ENSMUST00000136008 Ergic2-001 148179079-148212374 protein_coding
  ENSMUST00000140311 Ergic2-009 148188037-148196528 retained_intron
  ENSMUST00000143282 Ergic2-014 148181310-148188092 processed_transcript
  ENSMUST00000145162 Ergic2-010 148190919-148196345 processed_transcript
  ENSMUST00000148437 Ergic2-008 148198958-148211977 retained_intron
  ENSMUST00000149631 Ergic2-013 148183046-148189706 retained_intron
  ENSMUST00000150980 Ergic2-005 148202248-148212021 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032446ENSMUST00000032447ENSMUST00000125469ENSMUST00000126698ENSMUST00000126773ENSMUST00000130242ENSMUST00000136008ENSMUST00000143282ENSMUST00000148437
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032446 N/A N/A 6.316±0.00 N/A N/A N/A N/A N/A 9.924±1.07 N/A 8.673±0.55 10.311±0.50 22.150±4.93 14.280±0.00
ENSMUST00000032447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.154±5.79
ENSMUST00000125469 8.788±0.00 6.591±1.09 N/A N/A N/A 7.415±0.00 N/A 6.680±0.00 11.027±4.21 N/A N/A 10.301±2.51 N/A N/A
ENSMUST00000126698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 76.460±20.16 46.211±0.00
ENSMUST00000126773 7.488±1.35 N/A N/A N/A 7.703±4.39 6.923±0.00 5.800±0.55 5.153±0.01 5.482±0.39 N/A N/A N/A N/A 38.014±5.94
ENSMUST00000130242 10.591±2.60 N/A N/A N/A 8.865±4.02 5.116±0.38 9.197±1.71 9.966±3.10 9.881±4.63 9.265±3.47 N/A 8.737±3.18 20.319±4.85 61.201±24.96
ENSMUST00000136008 4.310±1.40 N/A 7.443±0.22 7.153±2.90 2.637±0.97 1.881±0.61 2.747±0.20 3.734±0.85 5.714±2.58 2.025±0.61 3.208±0.46 4.229±2.47 9.769±2.97 3.840±0.00
ENSMUST00000143282 N/A N/A N/A N/A N/A N/A N/A 7.741±0.00 N/A N/A N/A 18.441±1.20 38.470±1.04 N/A
ENSMUST00000148437 N/A 9.700±1.37 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0002 CGP 6:147475871-148182758
CIL_0006HR CIL_0006HR_0002 CGP 6:148047259-148212374

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IEA nucleolus
GO:0005783 IEA endoplasmic reticulum
GO:0005793 ISS endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0006888 ISS ER to Golgi vesicle-mediated transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020224 ERGIC2 (1 of 2) ERGIC and golgi 2 protein_coding Danio_rerio
ENSDARG00000051936 ergic2 ERGIC and golgi 2 protein_coding Danio_rerio
ENSG00000087502 ERGIC2 ERGIC and golgi 2 protein_coding Homo_sapiens

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