C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRAM domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424536 GRAMD1A-015 ENSG00000089351 9606 + 19:35000456-35010639 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungENST00000424536
Transcript ID Breast Heart Kidney Liver Lung
ENST00000424536 2.052±0.00 0.263±0.00 3.646±2.15 2.505±1.67 38.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UF CIL_0003UF_0002 CGP 19:34994784-35040448

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085636 Gramd1a-201 protein_coding Mus_musculus 0 664
ENSMUST00000001280 Gramd1a-001 protein_coding Mus_musculus 0 664
ENSMUST00000186634 Gramd1a-002 nonsense_mediated_decay Mus_musculus 0 664
ENSMUST00000185985 Gramd1a-003 retained_intron Mus_musculus 0 664
ENSMUST00000187679 Gramd1a-007 protein_coding Mus_musculus 0 628
ENSMUST00000188032 Gramd1a-004 retained_intron Mus_musculus 0 628
ENSMUST00000186723 Gramd1a-008 protein_coding Mus_musculus 0 425
ENSMUST00000185514 Gramd1a-006 nonsense_mediated_decay Mus_musculus 0 383
ENSDART00000108574 GRAMD1B (1 of 2)-201 protein_coding Danio_rerio 0 211
ENSMUST00000165104 Gramd1b-201 protein_coding Mus_musculus 2e-38 163
ENSMUST00000150977 Gramd1b-008 retained_intron Mus_musculus 2e-38 163
ENSMUST00000045682 Gramd1b-001 protein_coding Mus_musculus 2e-38 163
ENSMUST00000118159 Gramd1b-012 protein_coding Mus_musculus 2e-38 163
ENSMUST00000121357 Gramd1b-011 protein_coding Mus_musculus 2e-38 163
ENSMUST00000119373 Gramd1b-002 protein_coding Mus_musculus 8e-38 161

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