C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GRAM domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317991 GRAMD1A-003 ENSG00000089351 9606 + 19:35000287-35026469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryENST00000317991
Transcript ID Brain Liver Ovary
ENST00000317991 4.960±4.24 0.863±0.16 1.206±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UF CIL_0003UF_0002 CGP 19:34994784-35040448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001280 Gramd1a-001 protein_coding Mus_musculus 0 2457
ENSMUST00000085636 Gramd1a-201 protein_coding Mus_musculus 0 1711
ENSMUST00000186634 Gramd1a-002 nonsense_mediated_decay Mus_musculus 0 1709
ENSMUST00000185985 Gramd1a-003 retained_intron Mus_musculus 0 1709
ENSMUST00000188032 Gramd1a-004 retained_intron Mus_musculus 0 1674
ENSMUST00000187679 Gramd1a-007 protein_coding Mus_musculus 0 739
ENSMUST00000186723 Gramd1a-008 protein_coding Mus_musculus 0 425
ENSMUST00000185514 Gramd1a-006 nonsense_mediated_decay Mus_musculus 0 383
ENSDART00000108574 GRAMD1B (1 of 2)-201 protein_coding Danio_rerio 0 261
ENSMUST00000165104 Gramd1b-201 protein_coding Mus_musculus 0 233
ENSMUST00000045682 Gramd1b-001 protein_coding Mus_musculus 0 233
ENSMUST00000118159 Gramd1b-012 protein_coding Mus_musculus 0 233
ENSMUST00000121357 Gramd1b-011 protein_coding Mus_musculus 0 233
ENSMUST00000119373 Gramd1b-002 protein_coding Mus_musculus 0 231
ENSMUST00000150977 Gramd1b-008 retained_intron Mus_musculus 8e-38 163

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