C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: junctophilin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000092051 JPH4 9606 - 14:23568035-23578800 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356300 JPH4-001 23568035-23578800 protein_coding
  ENST00000397118 JPH4-002 23568038-23578785 protein_coding
  ENST00000544177 JPH4-004 23569415-23573001 protein_coding
  ENST00000553505 JPH4-005 23574951-23578570 retained_intron
  ENST00000622501 JPH4-201 23568035-23577457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENST00000356300ENST00000622501
Transcript ID Brain Ovary Testis
ENST00000356300 13.534±2.16 17.205±0.00 N/A
ENST00000622501 40.454±30.19 31.416±15.03 6.181±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_0003BV CIL_0003BV_0001 CGP 14:23559565-23578800
CIL_0001QP CIL_0001QP_0001 CGP 14:23568035-23645639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0007612 IEA learning
GO:0014701 TAS junctional sarcoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0043198 IEA dendritic shaft
GO:0048167 IEA regulation of synaptic plasticity
GO:0050885 IEA neuromuscular process controlling balance
GO:0060314 TAS regulation of ryanodine-sensitive calcium-release channel activity
GO:0060402 TAS calcium ion transport into cytosol

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022208 Jph4 junctophilin 4 protein_coding Mus_musculus

Loading