C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | junctophilin 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000397118  |
JPH4-002 |
ENSG00000092051 |
9606 | - |
14:23568038-23578785  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00090C | CIL_00090C_0001 | VISTA | 14:23078458-23681621 |
| CIL_0009BW | CIL_0009BW_0001 | VISTA | 14:23137378-23739005 |
| CIL_0008Q4 | CIL_0008Q4_0001 | VISTA | 14:23138150-23738498 |
| CIL_0008QH | CIL_0008QH_0001 | VISTA | 14:23142404-23743714 |
| CIL_0003BV | CIL_0003BV_0001 | CGP | 14:23559565-23578800 |
| CIL_0001QP | CIL_0001QP_0001 | CGP | 14:23568035-23645639 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005790 | IEA | smooth endoplasmic reticulum |
| GO:0005886 | IEA | plasma membrane |
| GO:0007612 | IEA | learning |
| GO:0014701 | TAS | junctional sarcoplasmic reticulum membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0043198 | IEA | dendritic shaft |
| GO:0048167 | IEA | regulation of synaptic plasticity |
| GO:0050885 | IEA | neuromuscular process controlling balance |
| GO:0060314 | TAS | regulation of ryanodine-sensitive calcium-release channel activity |
| GO:0060402 | TAS | calcium ion transport into cytosol |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000124493
|
Jph4-003 | protein_coding | Mus_musculus | 0 | 2913 |
|
ENSMUST00000022819
|
Jph4-001 | protein_coding | Mus_musculus | 0 | 2911 |
|
ENSMUST00000133954
|
Jph4-002 | retained_intron | Mus_musculus | 0 | 1764 |
