C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: junctophilin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356300 JPH4-001 ENSG00000092051 9606 - 14:23568035-23578800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000356300
Transcript ID Brain Ovary
ENST00000356300 13.534±2.16 17.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_0003BV CIL_0003BV_0001 CGP 14:23559565-23578800
CIL_0001QP CIL_0001QP_0001 CGP 14:23568035-23645639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0014701 TAS junctional sarcoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0060314 TAS regulation of ryanodine-sensitive calcium-release channel activity
GO:0060402 TAS calcium ion transport into cytosol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022819 Jph4-001 protein_coding Mus_musculus 0 3450
ENSMUST00000124493 Jph4-003 protein_coding Mus_musculus 0 2911
ENSMUST00000133954 Jph4-002 retained_intron Mus_musculus 0 2303

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