C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092051-ENSG00000100867 CGP 9606 14:23568035-23645639
GeneTranscriptPositionBiotype
ENSG00000092051 (JPH4)
junctophilin 4 		ENST00000356300 (JPH4-001) 23568035-23578800 protein_coding
ENST00000397118 (JPH4-002) 23568038-23578785 protein_coding
ENST00000544177 (JPH4-004) 23569415-23573001 protein_coding
ENST00000553505 (JPH4-005) 23574951-23578570 retained_intron
ENST00000622501 (JPH4-201) 23568035-23577457 protein_coding
ENSG00000100867 (DHRS2)
dehydrogenase/reductase (SDR family) member 2 		ENST00000250383 (DHRS2-001) 23636335-23645639 protein_coding
ENST00000344777 (DHRS2-002) 23636373-23645639 protein_coding
ENST00000432832 (DHRS2-003) 23630115-23644543 protein_coding
ENST00000553600 (DHRS2-009) 23639339-23645295 protein_coding
ENST00000553896 (DHRS2-004) 23630115-23642438 processed_transcript
ENST00000556550 (DHRS2-007) 23643045-23645639 retained_intron
ENST00000556701 (DHRS2-005) 23636367-23645637 retained_intron
ENST00000556729 (DHRS2-006) 23638032-23645639 retained_intron
ENST00000557535 (DHRS2-008) 23639293-23645639 protein_coding
ENST00000611765 (DHRS2-201) 23638816-23645637 protein_coding
ENSG00000258727 (RP11-66N24.3)
 ENST00000555968 (RP11-66N24.3-001) 23561097-23568073 antisense
ENSG00000274002 (RP11-66N24.6)
 ENST00000610501 (RP11-66N24.6-001) 23619201-23620012 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0001QP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022208-ENSMUSG00000022209 CGP 10090 14:55106830-55241435
GeneTranscriptPositionBiotype
ENSMUSG00000022208 (Jph4)
junctophilin 4 		ENSMUST00000022819 (Jph4-001) 55106830-55116935 protein_coding
ENSMUST00000124493 (Jph4-003) 55107277-55115552 protein_coding
ENSMUST00000132992 (Jph4-004) 55109642-55110558 retained_intron
ENSMUST00000133954 (Jph4-002) 55111490-55116580 retained_intron
ENSMUSG00000022209 (Dhrs2)
dehydrogenase/reductase member 2 		ENSMUST00000022820 (Dhrs2-001) 55222007-55241435 protein_coding
ENSMUST00000165432 (Dhrs2-201) 55234654-55241248 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QP_0001ENSG00000092051ENST00000356300ENST00000397118ENST00000544177ENST00000553505ENST00000622501ENSG00000100867ENST00000250383ENST00000344777ENST00000432832ENST00000553600ENST00000553896ENST00000556550ENST00000556701ENST00000556729ENST00000557535ENST00000611765ENSG00000258727ENST00000555968ENSG00000274002ENST00000610501CIL_0001QP_0002ENSMUSG00000022208ENSMUST00000022819ENSMUST00000124493ENSMUST00000132992ENSMUST00000133954ENSMUSG00000022209ENSMUST00000022820ENSMUST00000165432
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QP_0001ENSG00000092051ENST00000356300ENST00000622501ENSG00000100867ENST00000250383ENST00000344777ENST00000553600ENST00000553896ENST00000556701ENST00000556729ENST00000557535ENST00000611765ENSG00000258727ENST00000555968ENSG00000274002ENST00000610501CIL_0001QP_0002ENSMUSG00000022208ENSMUST00000022819ENSMUST00000124493ENSMUST00000132992ENSMUST00000133954ENSMUSG00000022209ENSMUST00000022820ENSMUST00000165432
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092051 ENST00000356300 N/A N/A N/A 13.534±2.16 N/A N/A N/A N/A N/A N/A N/A 17.205±0.00 N/A N/A
ENST00000397118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622501 N/A N/A N/A 40.454±30.19 N/A N/A N/A N/A N/A N/A N/A 31.416±15.03 N/A 6.181±0.00
ENSG00000100867 ENST00000250383 N/A N/A N/A N/A N/A N/A N/A 7.791±1.76 21.032±12.89 0.833±0.00 2.449±0.00 4.505±4.04 6.005±2.49 3.155±2.59
ENST00000344777 0.017±0.00 N/A N/A 0.123±0.00 N/A 0.388±0.00 0.346±0.00 3.423±0.00 N/A N/A N/A 0.151±0.00 N/A N/A
ENST00000432832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553600 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A
ENST00000553896 N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A N/A 0.716±0.00 N/A N/A N/A N/A
ENST00000556550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556701 0.037±0.00 0.257±0.00 N/A 0.192±0.00 0.056±0.00 0.007±0.00 0.046±0.00 N/A N/A N/A N/A N/A N/A 0.110±0.00
ENST00000556729 N/A N/A N/A N/A N/A 0.062±0.05 0.031±0.00 N/A 4.143±0.00 0.023±0.00 N/A N/A N/A N/A
ENST00000557535 N/A N/A N/A N/A N/A N/A 0.194±0.00 7.939±0.00 N/A 0.187±0.00 N/A 8.686±8.62 2.853±0.09 1.068±0.00
ENST00000611765 N/A N/A N/A 0.301±0.00 N/A N/A N/A N/A N/A N/A N/A 9.580±0.00 2.008±0.28 N/A
ENSG00000258727 ENST00000555968 2.125±0.00 12.245±0.00 1.508±0.00 N/A 1.358±0.00 1.423±0.00 N/A N/A 1.946±0.38 3.545±2.28 N/A 8.201±2.25 N/A N/A
ENSG00000274002 ENST00000610501 N/A N/A 0.095±0.00 0.053±0.00 N/A 0.079±0.01 0.071±0.00 0.467±0.30 0.507±0.00 0.270±0.00 N/A 0.044±0.02 N/A 0.109±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022208 ENSMUST00000022819 0.966±0.66 0.512±0.16 0.788±0.00 36.012±10.76 0.046±0.03 0.917±0.21 0.057±0.01 0.036±0.02 0.031±0.04 0.041±0.01 0.048±0.02 1.704±0.67 0.125±0.08 1.133±0.63
ENSMUST00000124493 1.012±0.91 1.531±0.68 0.494±0.01 16.800±4.06 0.156±0.04 1.460±0.34 0.055±0.03 0.048±0.02 0.029±0.03 0.095±0.02 0.060±0.02 4.046±1.43 0.083±0.06 1.966±0.39
ENSMUST00000132992 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A 0.148±0.00 N/A
ENSMUST00000133954 0.050±0.01 N/A N/A 8.612±0.27 0.065±0.02 0.634±0.00 0.019±0.00 0.033±0.01 0.011±0.01 N/A N/A 0.300±0.01 0.017±0.00 N/A
ENSMUSG00000022209 ENSMUST00000022820 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A 0.033±0.02 0.031±0.00 N/A 0.154±0.08 N/A 0.558±0.11
ENSMUST00000165432 N/A N/A 0.099±0.00 0.064±0.02 0.095±0.03 0.081±0.00 0.146±0.01 N/A 0.009±0.01 N/A 0.078±0.01 0.205±0.05 0.007±0.00 0.968±0.15

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