C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: parvalbumin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100362 PVALB 9606 - 22:36800684-36819479 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216200 PVALB-001 36800684-36819479 protein_coding
  ENST00000404171 PVALB-004 36800767-36815391 protein_coding
  ENST00000406910 PVALB-005 36800701-36817001 protein_coding
  ENST00000417718 PVALB-002 36800684-36817035 protein_coding
  ENST00000443735 PVALB-006 36813646-36817514 protein_coding
  ENST00000467935 PVALB-003 36813450-36817035 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216200ENST00000404171ENST00000406910ENST00000417718ENST00000443735ENST00000467935
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216200 N/A N/A N/A 5.099±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404171 N/A 0.698±0.00 N/A 16.303±0.00 N/A N/A N/A N/A N/A N/A 0.545±0.00 0.397±0.11 0.841±0.00
ENST00000406910 N/A N/A 0.470±0.00 N/A 0.092±0.00 0.036±0.00 N/A N/A 0.111±0.00 N/A N/A N/A N/A
ENST00000417718 N/A 1.179±0.00 2.788±0.00 37.092±30.17 0.102±0.00 0.026±0.00 10.886±9.63 2.115±0.00 0.118±0.00 3.286±0.00 0.235±0.00 0.923±0.36 1.149±0.82
ENST00000443735 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A 0.367±0.00 N/A N/A N/A 0.426±0.00
ENST00000467935 N/A N/A 0.774±0.00 N/A N/A N/A N/A 0.933±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SS CIL_0005SS_0001 CGP 22:36758202-36819479
CIL_0006F3 CIL_0006F3_0002 CGP 22:36800684-36878015

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0030424 IEA axon
GO:0042803 IEA protein homodimerization activity
GO:0043025 IEA neuronal cell body
GO:0043234 IEA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0051480 IEA cytosolic calcium ion homeostasis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009311 pvalb6 parvalbumin 6 protein_coding Danio_rerio
ENSDARG00000034705 pvalb7 parvalbumin 7 protein_coding Danio_rerio
ENSMUSG00000005716 Pvalb parvalbumin protein_coding Mus_musculus

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