C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005SS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100360-ENSG00000100362 CGP 9606 22:36758202-36819479
GeneTranscriptPositionBiotype
ENSG00000100362 (PVALB)
parvalbumin
ENST00000216200 (PVALB-001) 36800684-36819479 protein_coding
ENST00000404171 (PVALB-004) 36800767-36815391 protein_coding
ENST00000406910 (PVALB-005) 36800701-36817001 protein_coding
ENST00000417718 (PVALB-002) 36800684-36817035 protein_coding
ENST00000443735 (PVALB-006) 36813646-36817514 protein_coding
ENST00000467935 (PVALB-003) 36813450-36817035 retained_intron
ENSG00000234979 (CITF22-24E5.1)
ENST00000417792 (CITF22-24E5.1-001) 36816326-36819736 antisense
CIL_0005SS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016637-ENSMUSG00000005716 CGP 10090 15:78159465-78206400
GeneTranscriptPositionBiotype
ENSMUSG00000005716 (Pvalb)
parvalbumin
ENSMUST00000005860 (Pvalb-002) 78191114-78204237 protein_coding
ENSMUST00000120592 (Pvalb-001) 78191117-78206400 protein_coding
ENSMUSG00000016637 (Ift27)
intraflagellar transport 27
ENSMUST00000016781 (Ift27-201) 78159465-78174108 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SS_0001ENSG00000100362ENST00000216200ENST00000404171ENST00000406910ENST00000417718ENST00000443735ENST00000467935ENSG00000234979ENST00000417792CIL_0005SS_0002ENSMUSG00000005716ENSMUST00000005860ENSMUST00000120592ENSMUSG00000016637ENSMUST00000016781
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SS_0001ENSG00000100362ENST00000216200ENST00000404171ENST00000406910ENST00000417718ENST00000443735ENST00000467935ENSG00000234979ENST00000417792CIL_0005SS_0002ENSMUSG00000005716ENSMUST00000005860ENSMUST00000120592ENSMUSG00000016637ENSMUST00000016781
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100362 ENST00000216200 N/A N/A N/A 5.099±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404171 N/A 0.698±0.00 N/A 16.303±0.00 N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 0.397±0.11 0.841±0.00
ENST00000406910 N/A N/A 0.470±0.00 N/A N/A 0.092±0.00 0.036±0.00 N/A N/A 0.111±0.00 N/A N/A N/A N/A
ENST00000417718 N/A 1.179±0.00 2.788±0.00 37.092±30.17 N/A 0.102±0.00 0.026±0.00 10.886±9.63 2.115±0.00 0.118±0.00 3.286±0.00 0.235±0.00 0.923±0.36 1.149±0.82
ENST00000443735 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.367±0.00 N/A N/A N/A 0.426±0.00
ENST00000467935 N/A N/A 0.774±0.00 N/A N/A N/A N/A N/A 0.933±0.00 N/A N/A N/A N/A N/A
ENSG00000234979 ENST00000417792 N/A N/A N/A N/A N/A N/A N/A 0.483±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005716 ENSMUST00000005860 0.020±0.00 N/A N/A 2.196±1.70 N/A N/A 0.356±0.00 6.483±2.71 N/A N/A N/A N/A N/A 0.085±0.00
ENSMUST00000120592 0.095±0.07 N/A 0.029±0.01 10.490±14.24 391.689±244.02 N/A 0.169±0.07 19.539±8.58 0.011±0.00 2.413±1.64 6344.129±495.11 0.220±0.11 0.026±0.00 0.041±0.00
ENSMUSG00000016637 ENSMUST00000016781 15.719±6.41 21.565±3.74 13.204±0.50 14.396±6.36 16.421±7.61 18.016±5.75 7.908±1.21 20.360±6.53 8.461±1.99 14.391±6.87 5.551±1.91 28.502±10.53 6.024±1.35 26.670±11.24

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