C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: parvalbumin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005716 Pvalb 10090 - 15:78191114-78206400 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005860 Pvalb-002 78191114-78204237 protein_coding
  ENSMUST00000120592 Pvalb-001 78191117-78206400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005860ENSMUST00000120592
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005860 0.020±0.00 N/A 2.196±1.70 N/A 0.356±0.00 6.483±2.71 N/A N/A N/A N/A N/A 0.085±0.00
ENSMUST00000120592 0.095±0.07 0.029±0.01 10.490±14.24 391.689±244.02 0.169±0.07 19.539±8.58 0.011±0.00 2.413±1.64 6344.129±495.11 0.220±0.11 0.026±0.00 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SS CIL_0005SS_0002 CGP 15:78159465-78206400
CIL_0006F3 CIL_0006F3_0003 CGP 15:78191114-78262580

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0030424 IDA axon
GO:0042803 IEA protein homodimerization activity
GO:0043025 IEA neuronal cell body
GO:0043234 IEA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0051480 IEA cytosolic calcium ion homeostasis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009311 pvalb6 parvalbumin 6 protein_coding Danio_rerio
ENSDARG00000034705 pvalb7 parvalbumin 7 protein_coding Danio_rerio
ENSG00000100362 PVALB parvalbumin protein_coding Homo_sapiens

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