C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006F3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034705-ENSDARG00000040812 CGP 7955 22:31740421-31823776
GeneTranscriptPositionBiotype
ENSDARG00000034705 (pvalb7)
parvalbumin 7
ENSDART00000040761 (pvalb7-201) 31740429-31814074 protein_coding
ENSDART00000129859 (pvalb7-202) 31740429-31776505 protein_coding
ENSDART00000131386 (pvalb7-001) 31740421-31776687 protein_coding
ENSDART00000132702 (pvalb7-002) 31740675-31762879 protein_coding
ENSDARG00000040812 (ncf4)
neutrophil cytosolic factor 4
ENSDART00000032757 (ncf4-201) 31776627-31823774 protein_coding
ENSDART00000059820 (ncf4-001) 31776627-31823776 protein_coding
ENSDART00000133409 (ncf4-002) 31776612-31822671 protein_coding
CIL_0006F3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100362-ENSG00000100365 CGP 9606 22:36800684-36878015
GeneTranscriptPositionBiotype
ENSG00000100362 (PVALB)
parvalbumin
ENST00000216200 (PVALB-001) 36800684-36819479 protein_coding
ENST00000404171 (PVALB-004) 36800767-36815391 protein_coding
ENST00000406910 (PVALB-005) 36800701-36817001 protein_coding
ENST00000417718 (PVALB-002) 36800684-36817035 protein_coding
ENST00000443735 (PVALB-006) 36813646-36817514 protein_coding
ENST00000467935 (PVALB-003) 36813450-36817035 retained_intron
ENSG00000100365 (NCF4)
neutrophil cytosolic factor 4, 40kDa
ENST00000248899 (NCF4-001) 36860988-36878015 protein_coding
ENST00000397147 (NCF4-002) 36860988-36878015 protein_coding
ENST00000415063 (NCF4-003) 36872137-36877764 protein_coding
ENST00000447071 (NCF4-004) 36860988-36875832 protein_coding
ENSG00000234979 (CITF22-24E5.1)
ENST00000417792 (CITF22-24E5.1-001) 36816326-36819736 antisense
CIL_0006F3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005716-ENSMUSG00000071715 CGP 10090 15:78191114-78262580
GeneTranscriptPositionBiotype
ENSMUSG00000005716 (Pvalb)
parvalbumin
ENSMUST00000005860 (Pvalb-002) 78191114-78204237 protein_coding
ENSMUST00000120592 (Pvalb-001) 78191117-78206400 protein_coding
ENSMUSG00000071715 (Ncf4)
neutrophil cytosolic factor 4
ENSMUST00000096357 (Ncf4-001) 78244801-78262580 protein_coding
ENSMUST00000126028 (Ncf4-004) 78253246-78260769 processed_transcript
ENSMUST00000133618 (Ncf4-002) 78244844-78260994 protein_coding
ENSMUST00000146147 (Ncf4-005) 78255452-78260802 retained_intron
ENSMUST00000147303 (Ncf4-003) 78253032-78256030 retained_intron
ENSMUST00000148646 (Ncf4-006) 78260878-78262575 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F3_0001ENSDARG00000034705ENSDART00000040761ENSDART00000129859ENSDART00000131386ENSDART00000132702ENSDARG00000040812ENSDART00000032757ENSDART00000059820ENSDART00000133409CIL_0006F3_0002ENSG00000100362ENST00000216200ENST00000404171ENST00000406910ENST00000417718ENST00000443735ENST00000467935ENSG00000100365ENST00000248899ENST00000397147ENST00000415063ENST00000447071ENSG00000234979ENST00000417792CIL_0006F3_0003ENSMUSG00000005716ENSMUST00000005860ENSMUST00000120592ENSMUSG00000071715ENSMUST00000096357ENSMUST00000126028ENSMUST00000133618ENSMUST00000146147ENSMUST00000147303ENSMUST00000148646
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006F3_0001ENSDARG00000034705ENSDART00000040761ENSDART00000129859ENSDART00000132702ENSDARG00000040812ENSDART00000032757ENSDART00000059820ENSDART00000133409CIL_0006F3_0002ENSG00000100362ENST00000216200ENST00000404171ENST00000406910ENST00000417718ENST00000443735ENST00000467935ENSG00000100365ENST00000248899ENST00000397147ENST00000415063ENST00000447071ENSG00000234979ENST00000417792CIL_0006F3_0003ENSMUSG00000005716ENSMUST00000005860ENSMUST00000120592ENSMUSG00000071715ENSMUST00000096357ENSMUST00000133618ENSMUST00000146147ENSMUST00000147303ENSMUST00000148646
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034705 ENSDART00000040761 N/A N/A N/A 173.972±30.33 N/A N/A N/A 128.623±18.46 0.044±0.00 N/A N/A N/A N/A N/A
ENSDART00000129859 N/A N/A N/A N/A N/A N/A 5.747±4.22 134.629±0.00 N/A N/A 105.426±0.00 N/A N/A N/A
ENSDART00000131386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132702 N/A N/A N/A N/A N/A N/A N/A 133.563±0.00 N/A N/A 103.758±0.00 N/A N/A N/A
ENSDARG00000040812 ENSDART00000032757 N/A N/A N/A N/A N/A N/A 1.711±0.84 13.222±3.43 N/A N/A N/A N/A N/A N/A
ENSDART00000059820 N/A N/A N/A N/A N/A N/A 2.338±1.18 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133409 N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100362 ENST00000216200 N/A N/A N/A 5.099±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404171 N/A 0.698±0.00 N/A 16.303±0.00 N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 0.397±0.11 0.841±0.00
ENST00000406910 N/A N/A 0.470±0.00 N/A N/A 0.092±0.00 0.036±0.00 N/A N/A 0.111±0.00 N/A N/A N/A N/A
ENST00000417718 N/A 1.179±0.00 2.788±0.00 37.092±30.17 N/A 0.102±0.00 0.026±0.00 10.886±9.63 2.115±0.00 0.118±0.00 3.286±0.00 0.235±0.00 0.923±0.36 1.149±0.82
ENST00000443735 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.367±0.00 N/A N/A N/A 0.426±0.00
ENST00000467935 N/A N/A 0.774±0.00 N/A N/A N/A N/A N/A 0.933±0.00 N/A N/A N/A N/A N/A
ENSG00000100365 ENST00000248899 5.120±0.00 12.641±0.00 0.236±0.00 0.738±0.35 N/A 1.379±0.11 1.346±1.27 1.612±0.99 2.527±0.10 6.780±3.34 N/A 2.835±1.11 24.831±9.76 0.982±0.38
ENST00000397147 N/A 4.243±0.00 N/A N/A 1.236±0.13 N/A 0.334±0.00 N/A N/A 4.378±0.00 0.204±0.15 1.109±0.00 N/A 0.493±0.00
ENST00000415063 N/A N/A N/A N/A 0.678±0.00 N/A N/A N/A N/A N/A N/A 2.707±0.00 17.743±0.00 0.653±0.00
ENST00000447071 N/A N/A 0.260±0.00 N/A N/A 1.452±0.00 0.151±0.00 N/A N/A N/A 0.256±0.00 N/A N/A 0.449±0.00
ENSG00000234979 ENST00000417792 N/A N/A N/A N/A N/A N/A N/A 0.483±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005716 ENSMUST00000005860 0.020±0.00 N/A N/A 2.196±1.70 N/A N/A 0.356±0.00 6.483±2.71 N/A N/A N/A N/A N/A 0.085±0.00
ENSMUST00000120592 0.095±0.07 N/A 0.029±0.01 10.490±14.24 391.689±244.02 N/A 0.169±0.07 19.539±8.58 0.011±0.00 2.413±1.64 6344.129±495.11 0.220±0.11 0.026±0.00 0.041±0.00
ENSMUSG00000071715 ENSMUST00000096357 1.967±0.35 0.606±0.30 5.577±1.26 0.192±0.04 7.522±1.92 2.042±0.62 0.677±0.23 0.982±0.47 4.340±5.12 4.323±0.65 0.396±0.54 1.395±0.76 0.570±0.26 0.186±0.01
ENSMUST00000126028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133618 N/A 0.850±0.16 N/A 0.109±0.00 N/A 1.757±0.00 0.353±0.00 0.465±0.20 N/A 2.171±0.00 0.077±0.02 0.402±0.21 0.151±0.00 0.357±0.20
ENSMUST00000146147 N/A N/A N/A N/A N/A N/A N/A N/A 0.930±0.00 N/A N/A 1.758±0.00 0.645±0.38 N/A
ENSMUST00000147303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 0.111±0.00 N/A
ENSMUST00000148646 N/A 0.600±0.00 N/A 0.169±0.00 N/A N/A 0.406±0.00 0.631±0.05 20.735±8.71 N/A 0.456±0.53 0.803±0.22 3.673±3.28 0.102±0.00

Loading