C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: parvalbumin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417718 PVALB-002 ENSG00000100362 9606 - 22:36800684-36817035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000417718
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000417718 1.179±0.00 2.788±0.00 37.092±30.17 0.102±0.00 0.026±0.00 10.886±9.63 2.115±0.00 0.118±0.00 3.286±0.00 0.235±0.00 0.923±0.36 1.149±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SS CIL_0005SS_0001 CGP 22:36758202-36819479
CIL_0006F3 CIL_0006F3_0002 CGP 22:36800684-36878015

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005860 Pvalb-002 protein_coding Mus_musculus 0 632
ENSMUST00000120592 Pvalb-001 protein_coding Mus_musculus 0 593

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