C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: parvalbumin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216200 PVALB-001 ENSG00000100362 9606 - 22:36800684-36819479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000216200
Transcript ID Brain
ENST00000216200 5.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SS CIL_0005SS_0001 CGP 22:36758202-36819479
CIL_0006F3 CIL_0006F3_0002 CGP 22:36800684-36878015

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0030424 IEA axon
GO:0042803 IEA protein homodimerization activity
GO:0043025 IEA neuronal cell body
GO:0043234 IEA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0051480 IEA cytosolic calcium ion homeostasis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120592 Pvalb-001 protein_coding Mus_musculus 0 604
ENSMUST00000005860 Pvalb-002 protein_coding Mus_musculus 0 593

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