C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ran GTPase activating protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100401 RANGAP1 9606 - 22:41245611-41286251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356244 RANGAP1-001 41245611-41286251 protein_coding
  ENST00000405486 RANGAP1-003 41245611-41285965 protein_coding
  ENST00000418067 RANGAP1-008 41268097-41281638 protein_coding
  ENST00000422838 RANGAP1-006 41280933-41285905 protein_coding
  ENST00000446258 RANGAP1-007 41256021-41274660 protein_coding
  ENST00000452543 RANGAP1-009 41264744-41281621 protein_coding
  ENST00000455915 RANGAP1-004 41245615-41282514 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356244ENST00000405486ENST00000418067ENST00000446258ENST00000452543ENST00000455915
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356244 18.523±0.00 17.970±0.00 0.617±0.00 33.163±20.47 8.348±7.19 9.304±8.88 4.892±3.87 12.627±10.17 10.931±8.77 23.173±21.65 7.975±6.35 19.430±9.97 27.290±6.88 43.259±13.28
ENST00000405486 N/A N/A N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000418067 N/A N/A N/A N/A N/A 1.236±0.00 N/A N/A N/A N/A N/A 5.409±0.00 N/A N/A
ENST00000446258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.576±0.00 40.417±0.00 132.816±0.00
ENST00000452543 N/A N/A N/A N/A 2.663±0.00 N/A 1.536±0.00 N/A 3.347±0.00 1.897±0.00 N/A N/A N/A 57.328±0.00
ENST00000455915 N/A N/A 0.090±0.00 N/A N/A 0.394±0.00 N/A N/A 0.484±0.00 0.226±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V9 CIL_0000V9_0002 CGP 22:41229510-41286251
CIL_00065N CIL_00065N_0001 CGP 22:41245611-41360147

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0005098 IEA Ran GTPase activator activity
GO:0005515 IPI protein binding
GO:0005643 TAS nuclear pore
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction
GO:0032853 IEA positive regulation of Ran GTPase activity
GO:0046826 IDA negative regulation of protein export from nucleus
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041317 rangap1a RAN GTPase activating protein 1a protein_coding Danio_rerio
ENSDARG00000056059 rangap1b Ran GTPase activating protein 1b protein_coding Danio_rerio
ENSMUSG00000022391 Rangap1 RAN GTPase activating protein 1 protein_coding Mus_musculus

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