C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAN GTPase activating protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022391 Rangap1 10090 - 15:81704248-81729919 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052374 Rangap1-201 81704248-81729919 protein_coding
  ENSMUST00000170134 Rangap1-202 81704248-81729919 protein_coding
  ENSMUST00000171115 Rangap1-203 81704618-81729866 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052374ENSMUST00000170134ENSMUST00000171115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052374 13.772±3.05 15.512±2.30 12.178±0.65 37.759±2.64 11.676±3.39 18.693±1.90 5.698±0.72 10.657±2.17 28.042±18.20 11.189±0.84 8.378±1.07 18.912±3.16 37.535±18.60 N/A
ENSMUST00000170134 2.628±0.00 2.109±0.33 2.287±0.10 N/A 2.922±0.55 3.636±0.83 0.990±0.15 2.817±1.21 2.311±0.59 2.314±0.62 1.036±0.00 3.728±0.98 N/A N/A
ENSMUST00000171115 1.729±0.00 N/A N/A 41.665±0.00 N/A N/A N/A 1.662±0.00 N/A N/A N/A 20.627±0.00 28.533±21.00 88.995±8.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V9 CIL_0000V9_0003 CGP 15:81678296-81729919
CIL_00065N CIL_00065N_0002 CGP 15:81704248-81796269

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0005098 IEA Ran GTPase activator activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0032853 IEA positive regulation of Ran GTPase activity
GO:0046826 IEA negative regulation of protein export from nucleus
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041317 rangap1a RAN GTPase activating protein 1a protein_coding Danio_rerio
ENSDARG00000056059 rangap1b Ran GTPase activating protein 1b protein_coding Danio_rerio
ENSG00000100401 RANGAP1 Ran GTPase activating protein 1 protein_coding Homo_sapiens

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