C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ran GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356244 RANGAP1-001 ENSG00000100401 9606 - 22:41245611-41286251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356244
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356244 18.523±0.00 17.970±0.00 0.617±0.00 33.163±20.47 8.348±7.19 9.304±8.88 4.892±3.87 12.627±10.17 10.931±8.77 23.173±21.65 7.975±6.35 19.430±9.97 27.290±6.88 43.259±13.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V9 CIL_0000V9_0002 CGP 22:41229510-41286251
CIL_00065N CIL_00065N_0001 CGP 22:41245611-41360147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0005098 IEA Ran GTPase activator activity
GO:0005515 IPI protein binding
GO:0005643 TAS nuclear pore
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction
GO:0032853 IEA positive regulation of Ran GTPase activity
GO:0046826 IDA negative regulation of protein export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052374 Rangap1-201 protein_coding Mus_musculus 0 1930
ENSMUST00000171115 Rangap1-203 protein_coding Mus_musculus 0 1916
ENSMUST00000170134 Rangap1-202 protein_coding Mus_musculus 0 1916
ENSMUST00000161205 Gm7162-001 processed_pseudogene Mus_musculus 0 832

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