C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mindbomb E3 ubiquitin protein ligase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578646 MIB1-004 ENSG00000101752 9606 + 18:21704957-21864974 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverMuscleOvaryENST00000578646
Transcript ID Bladder Brain Breast Colon Heart Liver Muscle Ovary
ENST00000578646 2.775±0.00 4.582±0.00 5.420±0.00 5.451±0.00 2.265±0.00 6.648±0.00 0.486±0.00 7.754±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084R CIL_00084R_0001 VISTA 18:21458991-22061961
CIL_0005NX CIL_0005NX_0001 CGP 18:21650897-21870957
CIL_0005NR CIL_0005NR_0001 CGP 18:21704957-22202528

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052838 Mib1-001 protein_coding Mus_musculus 0 2837
ENSMUST00000165555 Mib1-201 protein_coding Mus_musculus 0 2804
ENSMUST00000124288 Mib1-004 protein_coding Mus_musculus 0 2518
ENSMUST00000131073 Mib1-003 retained_intron Mus_musculus 0 1013
ENSMUST00000150000 Mib1-002 protein_coding Mus_musculus 0 1002

Loading