C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphorylase kinase, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102893 PHKB 9606 + 16:47461123-47701523 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299167 PHKB-001 47461326-47701523 protein_coding
  ENST00000323584 PHKB-002 47461327-47700343 protein_coding
  ENST00000563376 PHKB-014 47461350-47511731 protein_coding
  ENST00000564711 PHKB-009 47696472-47699694 protein_coding
  ENST00000564873 PHKB-017 47462667-47499831 protein_coding
  ENST00000565424 PHKB-013 47461331-47548164 retained_intron
  ENST00000566037 PHKB-003 47461123-47547547 protein_coding
  ENST00000566044 PHKB-004 47461295-47699745 protein_coding
  ENST00000566275 PHKB-010 47660703-47676409 protein_coding
  ENST00000566319 PHKB-007 47664790-47700348 retained_intron
  ENST00000566436 PHKB-006 47594150-47598036 processed_transcript
  ENST00000566721 PHKB-015 47461329-47463522 processed_transcript
  ENST00000567200 PHKB-016 47462112-47463969 protein_coding
  ENST00000567402 PHKB-005 47461336-47590838 processed_transcript
  ENST00000568171 PHKB-008 47650830-47664390 retained_intron
  ENST00000568439 PHKB-011 47596428-47619429 protein_coding
  ENST00000570047 PHKB-012 47499756-47587758 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299167ENST00000323584ENST00000566044
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299167 N/A 3.796±0.00 N/A 5.179±0.00 4.303±1.28 4.431±0.00 2.311±0.97 3.401±1.50 2.599±0.70 4.386±0.00 10.429±0.00 3.685±1.28 5.229±2.55 6.532±2.37
ENST00000323584 1.923±0.00 4.573±0.00 N/A N/A 6.160±0.00 2.648±0.00 4.236±2.31 5.981±0.00 4.025±0.00 N/A 10.487±6.65 N/A 3.766±0.00 6.843±0.00
ENST00000566044 4.584±0.00 N/A 6.236±0.00 9.416±0.00 5.976±0.76 11.066±0.00 4.376±2.95 6.359±0.85 5.908±0.00 8.545±0.00 9.033±0.00 5.842±1.94 9.900±3.18 12.272±6.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VK CIL_0002VK_0001 CGP 16:47077703-47464149
CIL_0002VL CIL_0002VL_0001 CGP 16:47154387-47701523
CIL_0002VQ CIL_0002VQ_0001 CGP 16:47461123-48156018

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004689 IEA phosphorylase kinase activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0005964 IEA phosphorylase kinase complex
GO:0005975 TAS carbohydrate metabolic process
GO:0005976 IEA polysaccharide metabolic process
GO:0005977 TAS glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0006091 TAS generation of precursor metabolites and energy
GO:0006468 IEA protein phosphorylation
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078284 phkb phosphorylase kinase, beta protein_coding Danio_rerio
ENSMUSG00000036879 Phkb phosphorylase kinase beta protein_coding Mus_musculus

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