C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase kinase, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299167 PHKB-001 ENSG00000102893 9606 + 16:47461326-47701523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299167
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299167 3.796±0.00 5.179±0.00 4.303±1.28 4.431±0.00 2.311±0.97 3.401±1.50 2.599±0.70 4.386±0.00 10.429±0.00 3.685±1.28 5.229±2.55 6.532±2.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VK CIL_0002VK_0001 CGP 16:47077703-47464149
CIL_0002VL CIL_0002VL_0001 CGP 16:47154387-47701523
CIL_0002VQ CIL_0002VQ_0001 CGP 16:47461123-48156018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0005976 IEA polysaccharide metabolic process
GO:0005977 TAS glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0006091 TAS generation of precursor metabolites and energy
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053771 Phkb-001 protein_coding Mus_musculus 0 3899
ENSDART00000148643 phkb-001 protein_coding Danio_rerio 0 1247
ENSDART00000112543 phkb-201 protein_coding Danio_rerio 0 1240
ENSMUST00000160731 Phkb-005 protein_coding Mus_musculus 0 1077
ENSMUST00000159882 Phkb-004 processed_transcript Mus_musculus 0 791
ENSMUST00000161850 Phkb-009 protein_coding Mus_musculus 0 776
ENSMUST00000160611 Phkb-003 nonsense_mediated_decay Mus_musculus 0 547
ENSMUST00000162464 Phkb-007 protein_coding Mus_musculus 0 544
ENSMUST00000162981 Phkb-008 nonsense_mediated_decay Mus_musculus 0 431
ENSMUST00000159716 Phkb-006 processed_transcript Mus_musculus 0 315

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