C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase kinase, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566044 PHKB-004 ENSG00000102893 9606 + 16:47461295-47699745 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000566044
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000566044 4.584±0.00 6.236±0.00 9.416±0.00 5.976±0.76 11.066±0.00 4.376±2.95 6.359±0.85 5.908±0.00 8.545±0.00 9.033±0.00 5.842±1.94 9.900±3.18 12.272±6.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VK CIL_0002VK_0001 CGP 16:47077703-47464149
CIL_0002VL CIL_0002VL_0001 CGP 16:47154387-47701523
CIL_0002VQ CIL_0002VQ_0001 CGP 16:47461123-48156018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0005976 IEA polysaccharide metabolic process
GO:0005977 IEA:TAS glycogen metabolic process
GO:0005980 TAS glycogen catabolic process
GO:0006006 TAS glucose metabolic process
GO:0006091 TAS generation of precursor metabolites and energy
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053771 Phkb-001 protein_coding Mus_musculus 0 4085
ENSDART00000148643 phkb-001 protein_coding Danio_rerio 0 1247
ENSDART00000112543 phkb-201 protein_coding Danio_rerio 0 1240
ENSMUST00000160731 Phkb-005 protein_coding Mus_musculus 0 1077
ENSMUST00000159882 Phkb-004 processed_transcript Mus_musculus 0 977
ENSMUST00000161850 Phkb-009 protein_coding Mus_musculus 0 682
ENSMUST00000162464 Phkb-007 protein_coding Mus_musculus 0 640
ENSMUST00000160611 Phkb-003 nonsense_mediated_decay Mus_musculus 0 621
ENSMUST00000162981 Phkb-008 nonsense_mediated_decay Mus_musculus 0 435
ENSMUST00000159716 Phkb-006 processed_transcript Mus_musculus 0 414

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