C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NDRG family member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103034 NDRG4 9606 + 16:58462846-58513628 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000258187 NDRG4-001 58463665-58513628 protein_coding
  ENST00000356752 NDRG4-007 58500143-58511735 protein_coding
  ENST00000394279 NDRG4-201 58464822-58513618 protein_coding
  ENST00000394282 NDRG4-002 58464024-58513619 protein_coding
  ENST00000421602 NDRG4-003 58464301-58513413 retained_intron
  ENST00000561681 NDRG4-020 58506924-58511558 retained_intron
  ENST00000561720 NDRG4-037 58495456-58507197 retained_intron
  ENST00000561724 NDRG4-038 58472187-58504633 protein_coding
  ENST00000561730 NDRG4-015 58507728-58509389 retained_intron
  ENST00000561738 NDRG4-043 58503833-58507819 protein_coding
  ENST00000561779 NDRG4-045 58464304-58504240 protein_coding
  ENST00000562350 NDRG4-016 58507499-58509177 retained_intron
  ENST00000562725 NDRG4-041 58463716-58506956 processed_transcript
  ENST00000562731 NDRG4-029 58500145-58504381 protein_coding
  ENST00000562764 NDRG4-032 58463631-58504258 nonsense_mediated_decay
  ENST00000562930 NDRG4-031 58500143-58504385 nonsense_mediated_decay
  ENST00000562999 NDRG4-010 58500143-58513417 protein_coding
  ENST00000563022 NDRG4-023 58500143-58504259 processed_transcript
  ENST00000563209 NDRG4-014 58510711-58513410 retained_intron
  ENST00000563317 NDRG4-024 58500143-58501395 retained_intron
  ENST00000563799 NDRG4-004 58500143-58513410 protein_coding
  ENST00000563978 NDRG4-027 58500143-58506409 protein_coding
  ENST00000564126 NDRG4-033 58463713-58506461 protein_coding
  ENST00000564207 NDRG4-040 58463370-58504642 protein_coding
  ENST00000564486 NDRG4-052 58465042-58504661 protein_coding
  ENST00000564867 NDRG4-050 58464282-58504254 nonsense_mediated_decay
  ENST00000564960 NDRG4-022 58500145-58506435 retained_intron
  ENST00000565088 NDRG4-044 58500090-58504618 protein_coding
  ENST00000565304 NDRG4-054 58463723-58504661 protein_coding
  ENST00000565430 NDRG4-051 58464306-58504265 protein_coding
  ENST00000565434 NDRG4-048 58464774-58504607 protein_coding
  ENST00000565981 NDRG4-012 58505989-58513413 retained_intron
  ENST00000566041 NDRG4-047 58464313-58495008 protein_coding
  ENST00000566061 NDRG4-042 58464318-58511460 nonsense_mediated_decay
  ENST00000566065 NDRG4-034 58464282-58503876 processed_transcript
  ENST00000566192 NDRG4-008 58500047-58513619 protein_coding
  ENST00000566265 NDRG4-013 58509149-58513415 retained_intron
  ENST00000566585 NDRG4-021 58500145-58504733 retained_intron
  ENST00000566618 NDRG4-026 58501503-58506590 protein_coding
  ENST00000566656 NDRG4-025 58501468-58504636 protein_coding
  ENST00000567063 NDRG4-053 58464306-58506431 protein_coding
  ENST00000567454 NDRG4-035 58464282-58504277 protein_coding
  ENST00000567667 NDRG4-049 58463725-58504629 protein_coding
  ENST00000568005 NDRG4-017 58506121-58507962 retained_intron
  ENST00000568424 NDRG4-030 58500146-58504192 protein_coding
  ENST00000568464 NDRG4-028 58500143-58504254 nonsense_mediated_decay
  ENST00000568640 NDRG4-006 58500107-58511641 protein_coding
  ENST00000568999 NDRG4-039 58462846-58504649 protein_coding
  ENST00000569026 NDRG4-019 58506382-58511558 protein_coding
  ENST00000569404 NDRG4-046 58463704-58504397 protein_coding
  ENST00000569408 NDRG4-018 58506980-58511932 protein_coding
  ENST00000569539 NDRG4-055 58463710-58506946 protein_coding
  ENST00000569578 NDRG4-036 58464301-58499398 processed_transcript
  ENST00000569923 NDRG4-005 58500143-58511670 protein_coding
  ENST00000570248 NDRG4-009 58500143-58513618 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258187ENST00000394282ENST00000561738ENST00000562999ENST00000563209ENST00000563317ENST00000565981ENST00000566192ENST00000566265ENST00000566585ENST00000568005ENST00000569026ENST00000569408ENST00000570248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258187 6.074±0.00 0.751±0.00 N/A N/A 0.835±0.00 N/A 57.762±46.96 N/A 0.541±0.00 4.587±0.00 N/A 0.479±0.20 1.009±0.00 21.708±7.30
ENST00000394282 N/A N/A N/A N/A N/A N/A 7.274±0.00 N/A N/A N/A N/A N/A 0.190±0.00 N/A
ENST00000561738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.039±0.00 N/A N/A N/A
ENST00000562999 N/A N/A N/A 20.610±0.00 N/A 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563209 N/A N/A N/A N/A 0.563±0.00 N/A N/A N/A N/A N/A N/A 0.519±0.09 0.481±0.02 N/A
ENST00000563317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.164±0.00 N/A N/A
ENST00000565981 N/A 0.761±0.00 0.170±0.00 N/A N/A N/A N/A 0.479±0.00 0.593±0.00 N/A N/A N/A N/A N/A
ENST00000566192 N/A N/A N/A 20.328±0.00 0.267±0.00 N/A N/A N/A N/A N/A N/A 0.993±0.00 N/A N/A
ENST00000566265 8.404±0.00 2.737±0.00 N/A 88.261±54.62 1.371±0.00 2.847±2.42 60.949±49.79 2.401±0.00 0.577±0.00 5.094±0.00 0.412±0.28 0.838±0.32 1.038±0.33 22.919±4.36
ENST00000566585 N/A N/A N/A N/A N/A 1.990±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568005 N/A N/A 0.693±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569026 N/A N/A 0.439±0.00 N/A N/A 1.319±0.00 N/A N/A N/A N/A N/A 0.762±0.00 N/A N/A
ENST00000569408 N/A N/A N/A N/A 1.730±0.00 1.783±0.00 N/A N/A N/A N/A 1.027±0.00 N/A N/A N/A
ENST00000570248 N/A N/A 0.050±0.00 97.233±0.00 N/A 1.591±0.00 N/A 0.566±0.00 0.164±0.00 N/A N/A 0.610±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IX CIL_0004IX_0001 CGP 16:58295080-58513628
CIL_0004IY CIL_0004IY_0001 CGP 16:58462846-58521181

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 NAS cytoplasm
GO:0006950 NAS response to stress
GO:0016049 NAS cell growth
GO:0030154 NAS cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062236 ndrg4 N-myc downstream regulated gene 4 protein_coding Danio_rerio
ENSMUSG00000036564 Ndrg4 N-myc downstream regulated gene 4 protein_coding Mus_musculus

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