C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nitrogen permease regulator-like 3 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103148 NPRL3 9606 - 16:84271-138860 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399953 NPRL3-003 85801-138512 protein_coding
  ENST00000419636 NPRL3-011 112660-138335 protein_coding
  ENST00000422814 NPRL3-012 98212-138361 nonsense_mediated_decay
  ENST00000456528 NPRL3-006 110525-138677 nonsense_mediated_decay
  ENST00000457916 NPRL3-013 98145-138361 nonsense_mediated_decay
  ENST00000464069 NPRL3-009 92791-98160 retained_intron
  ENST00000468260 NPRL3-010 98230-138666 protein_coding
  ENST00000473674 NPRL3-008 93259-119405 processed_transcript
  ENST00000483663 NPRL3-014 98145-138345 nonsense_mediated_decay
  ENST00000610509 NPRL3-005 84271-91086 retained_intron
  ENST00000611875 NPRL3-015 85820-138860 protein_coding
  ENST00000620134 NPRL3-201 84274-138860 protein_coding
  ENST00000621703 NPRL3-002 85801-138670 nonsense_mediated_decay
  ENST00000622194 NPRL3-004 85386-138349 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419636ENST00000457916ENST00000468260ENST00000610509ENST00000611875ENST00000620134ENST00000621703ENST00000622194
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419636 N/A N/A N/A N/A N/A 0.831±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457916 N/A N/A N/A N/A 1.547±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468260 N/A N/A N/A N/A N/A N/A N/A 1.213±0.00 N/A N/A N/A N/A N/A N/A
ENST00000610509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.938±0.00 N/A N/A N/A
ENST00000611875 N/A N/A 0.292±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620134 3.736±0.00 N/A N/A N/A 4.636±0.00 N/A N/A 3.281±0.00 N/A 3.389±0.00 N/A 9.360±0.00 N/A 3.592±0.00
ENST00000621703 N/A N/A N/A N/A N/A N/A 0.268±0.00 0.422±0.00 N/A N/A N/A N/A N/A N/A
ENST00000622194 14.208±0.00 10.890±0.00 N/A 7.514±0.00 10.986±0.00 9.614±0.00 7.487±0.00 9.026±0.00 7.312±0.00 9.672±0.00 11.786±0.00 10.218±5.84 7.829±2.13 11.538±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801
CIL_0007A5 CIL_0007A5_0002 CGP 16:58059-85853
CIL_00031O CIL_00031O_0002 CGP 16:77007-138860

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003281 IEA ventricular septum development
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0035909 IEA aorta morphogenesis
GO:0043547 IEA positive regulation of GTPase activity
GO:0048738 IEA cardiac muscle tissue development
GO:0060021 IEA palate development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010918 nprl3 nitrogen permease regulator-like 3 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000020289 Nprl3 nitrogen permease regulator-like 3 protein_coding Mus_musculus

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