C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nitrogen permease regulator-like 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621703 NPRL3-002 ENSG00000103148 9606 - 16:85801-138670 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyENST00000621703
Transcript ID Heart Kidney
ENST00000621703 0.268±0.00 0.422±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801
CIL_0007A5 CIL_0007A5_0002 CGP 16:58059-85853
CIL_00031O CIL_00031O_0002 CGP 16:77007-138860

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137950 Nprl3-016 nonsense_mediated_decay Mus_musculus 0 1820
ENSMUST00000124640 Nprl3-002 nonsense_mediated_decay Mus_musculus 0 1583
ENSMUST00000020530 Nprl3-013 protein_coding Mus_musculus 0 1574
ENSMUST00000141859 Nprl3-001 nonsense_mediated_decay Mus_musculus 0 1574
ENSMUST00000109390 Nprl3-005 processed_transcript Mus_musculus 0 1574
ENSMUST00000109389 Nprl3-012 protein_coding Mus_musculus 0 1568
ENSMUST00000136903 Nprl3-014 nonsense_mediated_decay Mus_musculus 0 928
ENSMUST00000146890 Nprl3-006 retained_intron Mus_musculus 0 645
ENSMUST00000148636 Nprl3-011 retained_intron Mus_musculus 0 462
ENSMUST00000125256 Nprl3-010 retained_intron Mus_musculus 0 313

Loading