C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nitrogen permease regulator-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020289 Nprl3 10090 - 11:32225628-32267707 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020530 Nprl3-013 32231963-32267707 protein_coding
  ENSMUST00000109389 Nprl3-012 32232951-32267547 protein_coding
  ENSMUST00000109390 Nprl3-005 32231263-32256413 processed_transcript
  ENSMUST00000123411 Nprl3-008 32241661-32250178 processed_transcript
  ENSMUST00000124640 Nprl3-002 32225628-32267689 nonsense_mediated_decay
  ENSMUST00000125256 Nprl3-010 32236847-32239941 retained_intron
  ENSMUST00000127657 Nprl3-007 32247779-32250278 processed_transcript
  ENSMUST00000129010 Nprl3-004 32250163-32267615 protein_coding
  ENSMUST00000129573 Nprl3-015 32236893-32238036 retained_intron
  ENSMUST00000132856 Nprl3-003 32262818-32267551 processed_transcript
  ENSMUST00000136903 Nprl3-014 32232054-32267658 nonsense_mediated_decay
  ENSMUST00000137950 Nprl3-016 32232943-32267629 nonsense_mediated_decay
  ENSMUST00000141859 Nprl3-001 32231263-32267689 nonsense_mediated_decay
  ENSMUST00000146890 Nprl3-006 32239800-32254059 retained_intron
  ENSMUST00000148636 Nprl3-011 32232935-32234401 retained_intron
  ENSMUST00000149526 Nprl3-017 32239863-32267658 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020530ENSMUST00000109389ENSMUST00000137950ENSMUST00000141859ENSMUST00000146890
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020530 11.381±2.47 24.981±5.63 6.641±0.07 7.094±2.58 14.821±3.14 9.300±0.58 6.009±0.64 11.294±2.49 6.660±1.53 13.143±1.09 1.841±0.25 24.901±2.02 2.577±0.10 9.161±1.39
ENSMUST00000109389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.304±0.12 15.934±0.42 9.591±2.93 N/A
ENSMUST00000137950 20.260±6.78 28.342±6.92 N/A N/A 19.055±4.17 10.627±2.18 11.614±2.71 12.895±3.55 10.026±2.52 14.965±2.78 5.878±1.22 36.317±2.29 N/A 13.882±0.74
ENSMUST00000141859 N/A N/A N/A 3.288±0.00 N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A N/A
ENSMUST00000146890 N/A N/A N/A N/A 27.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003281 IMP ventricular septum development
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005575 ND cellular_component
GO:0035909 IMP aorta morphogenesis
GO:0043547 IEA positive regulation of GTPase activity
GO:0048738 IMP cardiac muscle tissue development
GO:0060021 IMP palate development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010918 nprl3 nitrogen permease regulator-like 3 (S. cerevisiae) protein_coding Danio_rerio
ENSG00000103148 NPRL3 nitrogen permease regulator-like 3 (S. cerevisiae) protein_coding Homo_sapiens

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