C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nitrogen permease regulator-like 3 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622194 NPRL3-004 ENSG00000103148 9606 - 16:85386-138349 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000622194
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000622194 14.208±0.00 10.890±0.00 7.514±0.00 10.986±0.00 9.614±0.00 7.487±0.00 9.026±0.00 7.312±0.00 9.672±0.00 11.786±0.00 10.218±5.84 7.829±2.13 11.538±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801
CIL_0007A5 CIL_0007A5_0002 CGP 16:58059-85853
CIL_00031O CIL_00031O_0002 CGP 16:77007-138860

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141859 Nprl3-001 nonsense_mediated_decay Mus_musculus 0 1903
ENSMUST00000020530 Nprl3-013 protein_coding Mus_musculus 0 1661
ENSMUST00000109390 Nprl3-005 processed_transcript Mus_musculus 0 1661
ENSMUST00000137950 Nprl3-016 nonsense_mediated_decay Mus_musculus 0 1574
ENSMUST00000109389 Nprl3-012 protein_coding Mus_musculus 0 1565
ENSMUST00000124640 Nprl3-002 nonsense_mediated_decay Mus_musculus 0 1338
ENSMUST00000136903 Nprl3-014 nonsense_mediated_decay Mus_musculus 0 928
ENSMUST00000146890 Nprl3-006 retained_intron Mus_musculus 0 732
ENSMUST00000148636 Nprl3-011 retained_intron Mus_musculus 0 462
ENSMUST00000020528 Mpg-001 protein_coding Mus_musculus 0 344
ENSMUST00000142964 Mpg-002 nonsense_mediated_decay Mus_musculus 0 344
ENSMUST00000125256 Nprl3-010 retained_intron Mus_musculus 0 313

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