C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily C, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105821 DNAJC2 9606 - 7:103312474-103344873 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000249270 DNAJC2-002 103312474-103344666 protein_coding
  ENST00000379257 DNAJC2-006 103323598-103344798 nonsense_mediated_decay
  ENST00000379263 DNAJC2-001 103312519-103344873 protein_coding
  ENST00000412522 DNAJC2-003 103335242-103344830 protein_coding
  ENST00000426036 DNAJC2-011 103322600-103344588 protein_coding
  ENST00000454277 DNAJC2-010 103322727-103344778 protein_coding
  ENST00000464253 DNAJC2-004 103312569-103344622 retained_intron
  ENST00000475065 DNAJC2-005 103312519-103341937 retained_intron
  ENST00000475090 DNAJC2-009 103316703-103319776 retained_intron
  ENST00000483637 DNAJC2-008 103322737-103324730 retained_intron
  ENST00000492497 DNAJC2-007 103312522-103317350 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379263ENST00000475065ENST00000492497
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379263 5.248±0.00 8.279±0.00 N/A 3.991±0.00 6.761±0.00 4.720±0.00 1.467±0.00 4.418±0.00 3.971±3.05 7.118±0.00 18.644±17.76 5.929±3.69 15.240±3.57
ENST00000475065 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.519±0.00 19.940±0.00 N/A N/A
ENST00000492497 N/A N/A 2.021±0.00 2.411±0.00 2.693±0.00 N/A N/A N/A 1.654±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CJ CIL_0005CJ_0001 CGP 7:103099776-103329511
CIL_0001RL CIL_0001RL_0002 CGP 7:103297422-103344873
CIL_0005C8 CIL_0005C8_0001 CGP 7:103312474-103369395

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IDA:IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0006260 IEA DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0030308 IEA negative regulation of cell growth
GO:0030544 IPI Hsp70 protein binding
GO:0031965 IDA nuclear membrane
GO:0042393 IDA histone binding
GO:0043130 IDA ubiquitin binding
GO:0044822 IDA poly(A) RNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0051083 TAS 'de novo' cotranslational protein folding
GO:2000279 IEA negative regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070477 dnajc2 DnaJ (Hsp40) homolog, subfamily C, member 2 protein_coding Danio_rerio
ENSMUSG00000029014 Dnajc2 DnaJ (Hsp40) homolog, subfamily C, member 2 protein_coding Mus_musculus

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