C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379263 DNAJC2-001 ENSG00000105821 9606 - 7:103312519-103344873 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379263
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379263 5.248±0.00 8.279±0.00 3.991±0.00 6.761±0.00 4.720±0.00 1.467±0.00 4.418±0.00 3.971±3.05 7.118±0.00 18.644±17.76 5.929±3.69 15.240±3.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CJ CIL_0005CJ_0001 CGP 7:103099776-103329511
CIL_0001RL CIL_0001RL_0002 CGP 7:103297422-103344873
CIL_0005C8 CIL_0005C8_0001 CGP 7:103312474-103369395

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IDA:IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0006260 IEA DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0030308 IEA negative regulation of cell growth
GO:0030544 IPI Hsp70 protein binding
GO:0031965 IDA nuclear membrane
GO:0042393 IDA histone binding
GO:0043130 IDA ubiquitin binding
GO:0044822 IDA poly(A) RNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0051083 TAS 'de novo' cotranslational protein folding
GO:2000279 IEA negative regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030771 Dnajc2-001 protein_coding Mus_musculus 0 2532
ENSMUST00000115193 Dnajc2-003 protein_coding Mus_musculus 0 2362
ENSMUST00000115195 Dnajc2-006 protein_coding Mus_musculus 0 2239
ENSMUST00000132962 Dnajc2-004 retained_intron Mus_musculus 0 1681
ENSMUST00000147987 Dnajc2-005 retained_intron Mus_musculus 0 922
ENSMUST00000115192 Dnajc2-002 protein_coding Mus_musculus 0 848

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