C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily C, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029014 Dnajc2 10090 - 5:21757267-21785251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030771 Dnajc2-001 21757267-21785251 protein_coding
  ENSMUST00000115192 Dnajc2-002 21774507-21785185 protein_coding
  ENSMUST00000115193 Dnajc2-003 21757272-21785184 protein_coding
  ENSMUST00000115195 Dnajc2-006 21757282-21785216 protein_coding
  ENSMUST00000132962 Dnajc2-004 21757281-21785170 retained_intron
  ENSMUST00000145955 Dnajc2-007 21766418-21768667 retained_intron
  ENSMUST00000147987 Dnajc2-005 21773522-21785154 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030771ENSMUST00000115193ENSMUST00000115195ENSMUST00000132962
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030771 3.630±3.09 5.869±0.02 13.537±3.23 1.886±1.02 2.078±0.88 4.185±2.02 9.119±5.51 4.261±4.55 7.851±0.52 17.303±12.19 31.705±32.12 52.710±21.45
ENSMUST00000115193 N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115195 N/A N/A N/A N/A N/A N/A 1.351±0.23 N/A 1.168±0.00 7.348±0.90 3.797±0.00 87.537±0.00
ENSMUST00000132962 0.284±0.00 0.884±0.09 2.113±0.51 N/A 0.166±0.00 N/A N/A N/A N/A 2.113±1.10 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0001RL CIL_0001RL_0003 CGP 5:21737141-21785251
CIL_0005C8 CIL_0005C8_0002 CGP 5:21757267-21803787

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 ISS chromatin binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0006260 IMP DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0030308 IEA negative regulation of cell growth
GO:0030544 IEA Hsp70 protein binding
GO:0031965 IEA nuclear membrane
GO:0042393 ISS histone binding
GO:0043130 ISS ubiquitin binding
GO:0044822 IEA poly(A) RNA binding
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:2000279 IMP negative regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070477 dnajc2 DnaJ (Hsp40) homolog, subfamily C, member 2 protein_coding Danio_rerio
ENSG00000105821 DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 protein_coding Homo_sapiens

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