C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ELAV like neuron-specific RNA binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107105 ELAVL2 9606 - 9:23690104-23826337 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223951 ELAVL2-002 23690104-23821480 protein_coding
  ENST00000380110 ELAVL2-004 23690104-23821275 protein_coding
  ENST00000380117 ELAVL2-001 23691811-23826337 protein_coding
  ENST00000397312 ELAVL2-201 23690107-23826065 protein_coding
  ENST00000423281 ELAVL2-005 23701415-23735565 protein_coding
  ENST00000440102 ELAVL2-003 23701523-23779375 protein_coding
  ENST00000462649 ELAVL2-006 23765045-23826174 processed_transcript
  ENST00000544538 ELAVL2-202 23690107-23821848 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000223951ENST00000380110ENST00000380117ENST00000397312ENST00000423281ENST00000440102ENST00000462649ENST00000544538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000223951 N/A 0.027±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A 8.628±3.28
ENST00000380110 N/A N/A 0.046±0.00 1.715±0.29 0.007±0.00 N/A 0.006±0.00 N/A N/A N/A N/A 2.397±0.00
ENST00000380117 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A
ENST00000397312 N/A N/A 0.007±0.00 4.880±0.00 0.021±0.02 N/A N/A N/A N/A N/A N/A N/A
ENST00000423281 0.144±0.00 0.470±0.00 N/A N/A 0.185±0.00 N/A 0.087±0.00 0.049±0.00 0.318±0.01 N/A N/A N/A
ENST00000440102 N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A 0.317±0.00 10.326±0.00
ENST00000462649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.00 N/A
ENST00000544538 0.010±0.00 N/A N/A 3.652±0.00 N/A N/A N/A N/A N/A N/A 0.021±0.00 6.108±2.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VP CIL_0007VP_0001 VISTA 9:23196287-23797396
CIL_00074G CIL_00074G_0001 CGP 9:23690104-24545946

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003730 TAS mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040732 elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) protein_coding Danio_rerio
ENSMUSG00000008489 Elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) protein_coding Mus_musculus

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