C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007VP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs309 VISTA 9606 9:23196287-23797396
GeneTranscriptPositionBiotype
ENSG00000107105 (ELAVL2)
ELAV like neuron-specific RNA binding protein 2 		ENST00000223951 (ELAVL2-002) 23690104-23821480 protein_coding
ENST00000380110 (ELAVL2-004) 23690104-23821275 protein_coding
ENST00000380117 (ELAVL2-001) 23691811-23826337 protein_coding
ENST00000397312 (ELAVL2-201) 23690107-23826065 protein_coding
ENST00000423281 (ELAVL2-005) 23701415-23735565 protein_coding
ENST00000440102 (ELAVL2-003) 23701523-23779375 protein_coding
ENST00000462649 (ELAVL2-006) 23765045-23826174 processed_transcript
ENST00000544538 (ELAVL2-202) 23690107-23821848 protein_coding
ENSG00000226626 (NOP56P2)
NOP56 ribonucleoprotein pseudogene 2 		ENST00000447491 (NOP56P2-001) 23681894-23682662 processed_pseudogene
ENSG00000233906 (RP11-315I14.2)
 ENST00000440888 (RP11-315I14.2-001) 23671788-23672399 lincRNA
CIL_0007VP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs309 VISTA 10090 4:90727482-91328588
GeneTranscriptPositionBiotype
ENSMUSG00000008489 (Elavl2)
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 		ENSMUST00000008633 (Elavl2-002) 91250763-91372054 protein_coding
ENSMUST00000102799 (Elavl2-001) 91250763-91399984 protein_coding
ENSMUST00000107109 (Elavl2-004) 91253240-91376434 protein_coding
ENSMUST00000107110 (Elavl2-008) 91250763-91372034 protein_coding
ENSMUST00000107111 (Elavl2-005) 91253240-91376434 protein_coding
ENSMUST00000107116 (Elavl2-007) 91253240-91313403 protein_coding
ENSMUST00000107118 (Elavl2-011) 91250763-91372069 protein_coding
ENSMUST00000107120 (Elavl2-003) 91250763-91376463 protein_coding
ENSMUST00000107124 (Elavl2-201) 91250769-91376496 protein_coding
ENSMUST00000128599 (Elavl2-012) 91253080-91254582 retained_intron
ENSMUST00000144769 (Elavl2-009) 91380432-91399976 processed_transcript
ENSMUST00000147611 (Elavl2-010) 91308677-91373030 protein_coding
ENSMUST00000176151 (Elavl2-006) 91399895-91400785 processed_transcript
ENSMUST00000176362 (Elavl2-015) 91308771-91371956 protein_coding
ENSMUST00000176469 (Elavl2-014) 91258666-91376307 retained_intron
ENSMUST00000177109 (Elavl2-013) 91264102-91356682 protein_coding
ENSMUSG00000079962 (Gm12643)
predicted gene 12643 		ENSMUST00000116078 (Gm12643-001) 91037900-91038273 processed_pseudogene
ENSMUSG00000081876 (Gm12644)
predicted gene 12644 		ENSMUST00000119935 (Gm12644-001) 91156682-91157287 processed_pseudogene
ENSMUSG00000082622 (Gm12632)
predicted gene 12632 		ENSMUST00000121223 (Gm12632-001) 90856883-90857377 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VP_0001ENSG00000107105ENST00000223951ENST00000380110ENST00000380117ENST00000397312ENST00000423281ENST00000440102ENST00000462649ENST00000544538ENSG00000226626ENST00000447491ENSG00000233906ENST00000440888CIL_0007VP_0002ENSMUSG00000008489ENSMUST00000008633ENSMUST00000102799ENSMUST00000107109ENSMUST00000107110ENSMUST00000107111ENSMUST00000107116ENSMUST00000107118ENSMUST00000107120ENSMUST00000107124ENSMUST00000128599ENSMUST00000144769ENSMUST00000147611ENSMUST00000176151ENSMUST00000176362ENSMUST00000176469ENSMUST00000177109ENSMUSG00000079962ENSMUST00000116078ENSMUSG00000081876ENSMUST00000119935ENSMUSG00000082622ENSMUST00000121223
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VP_0001ENSG00000107105ENST00000223951ENST00000380110ENST00000380117ENST00000397312ENST00000423281ENST00000440102ENST00000462649ENST00000544538ENSG00000226626ENST00000447491ENSG00000233906ENST00000440888CIL_0007VP_0002ENSMUSG00000008489ENSMUST00000008633ENSMUST00000102799ENSMUST00000107109ENSMUST00000107110ENSMUST00000107111ENSMUST00000107116ENSMUST00000107118ENSMUST00000107120ENSMUST00000107124ENSMUST00000128599ENSMUST00000147611ENSMUST00000176362ENSMUST00000176469ENSMUST00000177109ENSMUSG00000079962ENSMUST00000116078ENSMUSG00000081876ENSMUST00000119935ENSMUSG00000082622ENSMUST00000121223
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107105 ENST00000223951 N/A 0.027±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A 8.628±3.28
ENST00000380110 N/A N/A 0.046±0.00 1.715±0.29 0.007±0.00 N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A 2.397±0.00
ENST00000380117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A
ENST00000397312 N/A N/A 0.007±0.00 4.880±0.00 0.021±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423281 0.144±0.00 0.470±0.00 N/A N/A 0.185±0.00 N/A 0.087±0.00 N/A 0.049±0.00 0.318±0.01 N/A N/A N/A N/A
ENST00000440102 N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A 0.317±0.00 N/A 10.326±0.00
ENST00000462649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A
ENST00000544538 0.010±0.00 N/A N/A 3.652±0.00 N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 6.108±2.24
ENSG00000226626 ENST00000447491 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233906 ENST00000440888 N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A 0.191±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008489 ENSMUST00000008633 N/A N/A 0.127±0.00 7.258±3.12 N/A N/A 0.049±0.00 0.084±0.00 0.036±0.00 N/A N/A 1.469±0.78 N/A 0.414±0.09
ENSMUST00000102799 N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107109 N/A 0.220±0.07 N/A N/A N/A N/A N/A 0.047±0.00 0.032±0.00 N/A N/A 0.775±0.00 N/A N/A
ENSMUST00000107110 0.050±0.02 N/A N/A N/A 0.073±0.03 0.106±0.01 0.021±0.00 N/A 0.032±0.02 0.064±0.00 N/A 1.516±0.35 0.043±0.03 0.514±0.29
ENSMUST00000107111 0.030±0.00 N/A N/A N/A 0.046±0.01 N/A 0.057±0.00 N/A 0.055±0.00 0.035±0.00 N/A 0.943±0.00 0.048±0.00 0.434±0.04
ENSMUST00000107116 0.052±0.00 N/A N/A N/A N/A 0.141±0.00 0.089±0.02 0.056±0.02 N/A 0.035±0.00 N/A N/A 0.013±0.00 0.430±0.00
ENSMUST00000107118 N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A 0.304±0.00
ENSMUST00000107120 N/A N/A N/A 5.899±3.22 N/A N/A N/A 0.042±0.00 0.087±0.00 N/A N/A 0.201±0.00 N/A N/A
ENSMUST00000107124 N/A 0.019±0.00 N/A 15.669±1.23 N/A 0.064±0.00 0.076±0.00 0.063±0.00 0.016±0.00 0.036±0.00 N/A N/A N/A N/A
ENSMUST00000128599 N/A N/A N/A N/A N/A 0.056±0.00 0.109±0.07 N/A 0.012±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147611 N/A 0.493±0.06 N/A N/A 0.165±0.00 0.204±0.12 0.114±0.00 0.270±0.08 N/A 0.118±0.00 N/A 5.392±2.68 N/A 2.695±0.60
ENSMUST00000176151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176362 N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176469 0.026±0.00 N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.014±0.00 N/A
ENSMUST00000177109 N/A N/A N/A 61.090±0.00 N/A N/A 0.260±0.04 N/A 0.072±0.00 N/A N/A 4.350±0.00 0.166±0.00 4.153±0.00
ENSMUSG00000079962 ENSMUST00000116078 N/A N/A 0.036±0.00 0.035±0.00 0.540±0.00 N/A N/A N/A 0.043±0.00 N/A N/A 0.424±0.05 0.370±0.30 N/A
ENSMUSG00000081876 ENSMUST00000119935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A
ENSMUSG00000082622 ENSMUST00000121223 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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