C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007VP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs309 VISTA 9606 9:23196287-23797396
GeneTranscriptPositionBiotype
ENSG00000107105 (ELAVL2)
ELAV like neuron-specific RNA binding protein 2 		ENST00000223951 (ELAVL2-002) 23690104-23821480 protein_coding
ENST00000380110 (ELAVL2-004) 23690104-23821275 protein_coding
ENST00000380117 (ELAVL2-001) 23691811-23826337 protein_coding
ENST00000397312 (ELAVL2-201) 23690107-23826065 protein_coding
ENST00000423281 (ELAVL2-005) 23701415-23735565 protein_coding
ENST00000440102 (ELAVL2-003) 23701523-23779375 protein_coding
ENST00000462649 (ELAVL2-006) 23765045-23826174 processed_transcript
ENST00000544538 (ELAVL2-202) 23690107-23821848 protein_coding
ENSG00000226626 (NOP56P2)
NOP56 ribonucleoprotein pseudogene 2 		ENST00000447491 (NOP56P2-001) 23681894-23682662 processed_pseudogene
ENSG00000233906 (RP11-315I14.2)
 ENST00000440888 (RP11-315I14.2-001) 23671788-23672399 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007VP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs309 VISTA 10090 4:90727482-91328588
GeneTranscriptPositionBiotype
ENSMUSG00000008489 (Elavl2)
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 		ENSMUST00000008633 (Elavl2-002) 91250763-91372054 protein_coding
ENSMUST00000102799 (Elavl2-001) 91250763-91399984 protein_coding
ENSMUST00000107109 (Elavl2-004) 91253240-91376434 protein_coding
ENSMUST00000107110 (Elavl2-008) 91250763-91372034 protein_coding
ENSMUST00000107111 (Elavl2-005) 91253240-91376434 protein_coding
ENSMUST00000107116 (Elavl2-007) 91253240-91313403 protein_coding
ENSMUST00000107118 (Elavl2-011) 91250763-91372069 protein_coding
ENSMUST00000107120 (Elavl2-003) 91250763-91376463 protein_coding
ENSMUST00000107124 (Elavl2-201) 91250769-91376496 protein_coding
ENSMUST00000128599 (Elavl2-012) 91253080-91254582 retained_intron
ENSMUST00000144769 (Elavl2-009) 91380432-91399976 processed_transcript
ENSMUST00000147611 (Elavl2-010) 91308677-91373030 protein_coding
ENSMUST00000176151 (Elavl2-006) 91399895-91400785 processed_transcript
ENSMUST00000176362 (Elavl2-015) 91308771-91371956 protein_coding
ENSMUST00000176469 (Elavl2-014) 91258666-91376307 retained_intron
ENSMUST00000177109 (Elavl2-013) 91264102-91356682 protein_coding
ENSMUSG00000079962 (Gm12643)
predicted gene 12643 		ENSMUST00000116078 (Gm12643-001) 91037900-91038273 processed_pseudogene
ENSMUSG00000081876 (Gm12644)
predicted gene 12644 		ENSMUST00000119935 (Gm12644-001) 91156682-91157287 processed_pseudogene
ENSMUSG00000082622 (Gm12632)
predicted gene 12632 		ENSMUST00000121223 (Gm12632-001) 90856883-90857377 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VP_0001ENSG00000107105ENST00000223951ENST00000380110ENST00000380117ENST00000397312ENST00000423281ENST00000440102ENST00000462649ENST00000544538ENSG00000226626ENST00000447491ENSG00000233906ENST00000440888CIL_0007VP_0002ENSMUSG00000008489ENSMUST00000008633ENSMUST00000102799ENSMUST00000107109ENSMUST00000107110ENSMUST00000107111ENSMUST00000107116ENSMUST00000107118ENSMUST00000107120ENSMUST00000107124ENSMUST00000128599ENSMUST00000144769ENSMUST00000147611ENSMUST00000176151ENSMUST00000176362ENSMUST00000176469ENSMUST00000177109ENSMUSG00000079962ENSMUST00000116078ENSMUSG00000081876ENSMUST00000119935ENSMUSG00000082622ENSMUST00000121223
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007VP_0001ENSG00000107105ENST00000223951ENST00000380110ENST00000380117ENST00000397312ENST00000423281ENST00000440102ENST00000462649ENST00000544538ENSG00000226626ENST00000447491ENSG00000233906ENST00000440888CIL_0007VP_0002ENSMUSG00000008489ENSMUST00000008633ENSMUST00000102799ENSMUST00000107109ENSMUST00000107110ENSMUST00000107111ENSMUST00000107116ENSMUST00000107118ENSMUST00000107120ENSMUST00000107124ENSMUST00000128599ENSMUST00000147611ENSMUST00000176362ENSMUST00000176469ENSMUST00000177109ENSMUSG00000079962ENSMUST00000116078ENSMUSG00000081876ENSMUST00000119935ENSMUSG00000082622ENSMUST00000121223
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107105 ENST00000223951 N/A 0.027±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A 8.628±3.28
ENST00000380110 N/A N/A 0.046±0.00 1.715±0.29 0.007±0.00 N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A 2.397±0.00
ENST00000380117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A
ENST00000397312 N/A N/A 0.007±0.00 4.880±0.00 0.021±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423281 0.144±0.00 0.470±0.00 N/A N/A 0.185±0.00 N/A 0.087±0.00 N/A 0.049±0.00 0.318±0.01 N/A N/A N/A N/A
ENST00000440102 N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A 0.317±0.00 N/A 10.326±0.00
ENST00000462649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.876±0.00 N/A N/A
ENST00000544538 0.010±0.00 N/A N/A 3.652±0.00 N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 6.108±2.24
ENSG00000226626 ENST00000447491 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233906 ENST00000440888 N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A 0.191±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000008489 ENSMUST00000008633 N/A N/A 0.127±0.00 7.258±3.12 N/A N/A 0.049±0.00 0.084±0.00 0.036±0.00 N/A N/A 1.469±0.78 N/A 0.414±0.09
ENSMUST00000102799 N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107109 N/A 0.220±0.07 N/A N/A N/A N/A N/A 0.047±0.00 0.032±0.00 N/A N/A 0.775±0.00 N/A N/A
ENSMUST00000107110 0.050±0.02 N/A N/A N/A 0.073±0.03 0.106±0.01 0.021±0.00 N/A 0.032±0.02 0.064±0.00 N/A 1.516±0.35 0.043±0.03 0.514±0.29
ENSMUST00000107111 0.030±0.00 N/A N/A N/A 0.046±0.01 N/A 0.057±0.00 N/A 0.055±0.00 0.035±0.00 N/A 0.943±0.00 0.048±0.00 0.434±0.04
ENSMUST00000107116 0.052±0.00 N/A N/A N/A N/A 0.141±0.00 0.089±0.02 0.056±0.02 N/A 0.035±0.00 N/A N/A 0.013±0.00 0.430±0.00
ENSMUST00000107118 N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A 0.304±0.00
ENSMUST00000107120 N/A N/A N/A 5.899±3.22 N/A N/A N/A 0.042±0.00 0.087±0.00 N/A N/A 0.201±0.00 N/A N/A
ENSMUST00000107124 N/A 0.019±0.00 N/A 15.669±1.23 N/A 0.064±0.00 0.076±0.00 0.063±0.00 0.016±0.00 0.036±0.00 N/A N/A N/A N/A
ENSMUST00000128599 N/A N/A N/A N/A N/A 0.056±0.00 0.109±0.07 N/A 0.012±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147611 N/A 0.493±0.06 N/A N/A 0.165±0.00 0.204±0.12 0.114±0.00 0.270±0.08 N/A 0.118±0.00 N/A 5.392±2.68 N/A 2.695±0.60
ENSMUST00000176151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176362 N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176469 0.026±0.00 N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.014±0.00 N/A
ENSMUST00000177109 N/A N/A N/A 61.090±0.00 N/A N/A 0.260±0.04 N/A 0.072±0.00 N/A N/A 4.350±0.00 0.166±0.00 4.153±0.00
ENSMUSG00000079962 ENSMUST00000116078 N/A N/A 0.036±0.00 0.035±0.00 0.540±0.00 N/A N/A N/A 0.043±0.00 N/A N/A 0.424±0.05 0.370±0.30 N/A
ENSMUSG00000081876 ENSMUST00000119935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A
ENSMUSG00000082622 ENSMUST00000121223 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading