C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELAV like neuron-specific RNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380110 ELAVL2-004 ENSG00000107105 9606 - 9:23690104-23821275 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartTestisENST00000380110
Transcript ID Bladder Brain Breast Heart Testis
ENST00000380110 0.046±0.00 1.715±0.29 0.007±0.00 0.006±0.00 2.397±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VP CIL_0007VP_0001 VISTA 9:23196287-23797396
CIL_00074G CIL_00074G_0001 CGP 9:23690104-24545946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102799 Elavl2-001 protein_coding Mus_musculus 0 3073
ENSMUST00000107120 Elavl2-003 protein_coding Mus_musculus 0 3073
ENSMUST00000107118 Elavl2-011 protein_coding Mus_musculus 0 3073
ENSMUST00000008633 Elavl2-002 protein_coding Mus_musculus 0 3073
ENSMUST00000107110 Elavl2-008 protein_coding Mus_musculus 0 3073
ENSMUST00000107124 Elavl2-201 protein_coding Mus_musculus 0 3068
ENSMUST00000107116 Elavl2-007 protein_coding Mus_musculus 0 1917
ENSMUST00000107109 Elavl2-004 protein_coding Mus_musculus 0 1735
ENSMUST00000176469 Elavl2-014 retained_intron Mus_musculus 0 1168
ENSMUST00000107111 Elavl2-005 protein_coding Mus_musculus 0 1166
ENSMUST00000128599 Elavl2-012 retained_intron Mus_musculus 0 865
ENSMUST00000106601 Elavl4-007 protein_coding Mus_musculus 0 667
ENSMUST00000106600 Elavl4-006 protein_coding Mus_musculus 0 667
ENSMUST00000102722 Elavl4-005 protein_coding Mus_musculus 0 667
ENSMUST00000106598 Elavl4-003 protein_coding Mus_musculus 0 667
ENSMUST00000177109 Elavl2-013 protein_coding Mus_musculus 0 627
ENSMUST00000147611 Elavl2-010 protein_coding Mus_musculus 0 453
ENSMUST00000106597 Elavl4-004 protein_coding Mus_musculus 0 449
ENSMUST00000102723 Elavl4-002 protein_coding Mus_musculus 0 449
ENSMUST00000106603 Elavl4-001 protein_coding Mus_musculus 0 422
ENSMUST00000138972 Elavl4-012 protein_coding Mus_musculus 0 250
ENSMUST00000144554 Elavl4-010 processed_transcript Mus_musculus 0 217
ENSMUST00000153906 Elavl4-011 protein_coding Mus_musculus 2e-35 156
ENSMUST00000176362 Elavl2-015 protein_coding Mus_musculus 1e-32 147
ENSMUST00000142722 Elavl4-008 protein_coding Mus_musculus 5e-21 108

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