C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytohesin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591455 CYTH1-002 ENSG00000108669 9606 - 17:78674048-78782272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000591455
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000591455 8.586±0.00 3.391±2.07 1.243±0.00 0.989±0.00 2.644±0.00 1.637±0.61 4.258±2.19 4.317±0.00 1.958±0.59 4.178±0.41 6.444±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062H CIL_00062H_0001 CGP 17:78423697-78782297
CIL_00062I CIL_00062I_0001 CGP 17:78674048-78841441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IEA:IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0005886 IDA plasma membrane
GO:0008289 IEA lipid binding
GO:0030155 IDA regulation of cell adhesion
GO:0031234 ISS extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017276 Cyth1-001 protein_coding Mus_musculus 0 1500
ENSMUST00000106305 Cyth1-202 protein_coding Mus_musculus 0 1485
ENSMUST00000106302 Cyth1-201 protein_coding Mus_musculus 0 1448
ENSMUST00000100181 Cyth1-002 protein_coding Mus_musculus 0 1387
ENSMUST00000141243 Cyth1-005 processed_transcript Mus_musculus 0 542
ENSMUST00000131115 Cyth1-004 processed_transcript Mus_musculus 0 407
ENSMUST00000151165 Cyth1-003 protein_coding Mus_musculus 0 387

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